gokceneraslan / fit_nbinomView external linksLinks
Negative binomial maximum likelihood estimate implementation in Python using L-BFGS-B
☆15Jan 27, 2022Updated 4 years ago
Alternatives and similar repositories for fit_nbinom
Users that are interested in fit_nbinom are comparing it to the libraries listed below
Sorting:
- Single-cell copy number calling and event history reconstruction.☆28Dec 21, 2024Updated last year
- Enhanced Explainable Neural Network☆10Dec 25, 2021Updated 4 years ago
- ☆12Nov 7, 2025Updated 3 months ago
- Intuitive symbolic interface for constrained optimization problems. Write natural Python, get automatic gradients and solvers.☆24Feb 10, 2026Updated last week
- Work with trained factor models in Python☆37Oct 22, 2024Updated last year
- Transcriptional regulatory network inference from gene expression and prior information with LASSO-StARS☆15May 3, 2022Updated 3 years ago
- Tools to derive and apply corrections based on quantile mapping☆12Mar 15, 2018Updated 7 years ago
- Total copy number inference from single-cell RNA and ATAC sequing with cell clustering☆11Oct 31, 2024Updated last year
- The code repository for ICML25 paper "Understanding the Limits of Deep Tabular Methods with Temporal Shift"☆13May 1, 2025Updated 9 months ago
- Utilities for easy use of custom losses in CatBoost, LightGBM, XGBoost.☆10Feb 9, 2026Updated last week
- Website and slides for intro to bioinformatics class at Fred Hutch☆13Jun 4, 2018Updated 7 years ago
- ☆11Oct 31, 2023Updated 2 years ago
- Automatically use the latest “vX.X.X” tag as version in your Python package☆13Feb 10, 2026Updated last week
- Anomaly Screening Applying Pseudowells (ASAP). FORCE Hackathon, Stavanger 18-19 September 2018.☆10Jan 11, 2019Updated 7 years ago
- a spider to crawl new movie from douban.com☆11Oct 2, 2015Updated 10 years ago
- Repository containing the scripts regarding analyses in Zufferey & Tavernari et al.☆10Feb 22, 2021Updated 4 years ago
- Foundation Model for Probabilistic Electricity Price Forecasting☆17Sep 29, 2025Updated 4 months ago
- Genetic coordinates so simple, it feels like MAGIC!☆10Jan 29, 2026Updated 2 weeks ago
- HiC-Reg is a tool to predict Hi-C contact counts from one-dimensional regulatory signals☆11Aug 25, 2020Updated 5 years ago
- A project on how to incorporate physics constraints into deep learning architectures for downscaling or other super--resolution tasks.☆14Jun 8, 2023Updated 2 years ago
- LaTeX author support files for IMS journal AOAS.☆12Oct 9, 2025Updated 4 months ago
- A software that generates highly accurate topographic maps from LiDAR and Shapefile data.☆13Feb 9, 2026Updated last week
- Collisional cross-section prediction for modified and multiconformational peptides☆13Jan 19, 2026Updated 3 weeks ago
- Verify that a local file is identical to an object on Amazon S3, without having to download the object.☆12Sep 6, 2024Updated last year
- Goslin is the Grammar on succinct lipid nomenclature.☆12Nov 20, 2025Updated 2 months ago
- Single sample pathway analysis tools for omics data☆13Nov 9, 2024Updated last year
- Orthogonal Quantile Regression☆12Oct 21, 2021Updated 4 years ago
- A Demultiplexing Tool for Illumina Sequencers☆10Sep 27, 2016Updated 9 years ago
- ☆12Nov 9, 2020Updated 5 years ago
- Wrapper around MLForecast for more plug and play forecasting☆10Oct 23, 2023Updated 2 years ago
- Nextflow plugin implementation skeleton☆11Sep 1, 2025Updated 5 months ago
- WindSR Dataset contains more than 22,000 pairs of HR/LR wind speed images, which are processed using the NASA's GEOS-5 Nature Run dataset…☆11Jan 18, 2024Updated 2 years ago
- Python bindings for SingleR☆14Jan 6, 2026Updated last month
- ☆10Jul 23, 2020Updated 5 years ago
- Backpack REST API python implementation☆11Mar 30, 2024Updated last year
- Modeling Spatio-temporal Dynamics of Chromatin Marks☆12Aug 2, 2021Updated 4 years ago
- Minibatch loading for on-disk anndata files, co-developed by Lamin Labs and scverse☆24Updated this week
- R package to do the Ligand Receptor Analysis Visualization☆49Nov 27, 2025Updated 2 months ago
- Pixie pipeline described in Liu et al., Robust phenotyping of highly multiplexed tissue imaging data using pixel-level clustering☆12Aug 3, 2023Updated 2 years ago