bioFAM / MOFA2Links
Multi-Omics Factor Analysis
☆358Updated last year
Alternatives and similar repositories for MOFA2
Users that are interested in MOFA2 are comparing it to the libraries listed below
Sorting:
- Multi-Omics Factor Analysis☆253Updated 5 years ago
- Fast Gene Set Enrichment Analysis☆423Updated last week
- R package to infer biological activities from omics data using a collection of methods.☆273Updated 8 months ago
- Single sample Gene Set Enrichment analysis (ssGSEA) and PTM Enrichment Analysis (PTM-SEA)☆299Updated last month
- Functions for identifying and characterizing continuous developmental trajectories in single-cell data.☆311Updated last year
- Simple simulation of single-cell RNA sequencing data☆232Updated last week
- R package for integrating and analyzing multiple single-cell datasets☆421Updated 2 weeks ago
- A unified interface to immune deconvolution methods (CIBERSORT, EPIC, quanTIseq, TIMER, xCell, MCPcounter) and mouse deconvolution method…☆511Updated 2 weeks ago
- TRAjectory-based Differential Expression analysis for SEQuencing data☆283Updated 5 months ago
- Visualization of Functional Enrichment Result☆248Updated this week
- 🧬 immunarch [R package] – Multi-Modal Immune Repertoire Analytics for Immunotherapy and Vaccine Design☆333Updated this week
- Comparison of methods for trajectory inference on single-cell data 🥇☆218Updated 2 years ago
- High dimensional weighted gene co-expression network analysis☆445Updated 3 weeks ago
- R package implementation of Milo for testing for differential abundance in KNN graphs☆402Updated 2 months ago
- R package for the joint analysis of multiple single-cell RNA-seq datasets☆215Updated last year
- Table of software for the analysis of single-cell RNA-seq data.☆332Updated this week
- tools and notes for spatial omics☆328Updated 8 months ago
- Multi-sample multi-group scRNA-seq analysis tools☆211Updated 2 weeks ago
- Interpretation of cell states using reference single-cell maps☆299Updated 3 months ago
- Multi-subject Single Cell Deconvolution☆275Updated last year
- Gene set variation analysis☆230Updated last week
- Tools and methods for analysis of single cell assay data in R☆257Updated last month
- A toolkit for single-cell immune profiling☆355Updated last week
- Community-provided extensions to Seurat☆351Updated 11 months ago
- TCGAbiolinks☆339Updated last month
- Olink R package: A collection of functions to facilitate analysis of proteomic data from Olink. The goal of this package is to help users…☆121Updated last week
- Clone of the Bioconductor repository for the SingleR package.☆197Updated last month
- T/B cell receptor sequencing analysis notes☆268Updated 11 months ago
- scplotter is an R package that is built upon plotthis. It provides a set of functions to visualize single-cell sequencing data in an easy…☆242Updated last week
- Reference mapping for single-cell genomics☆389Updated last month