Alternatives and similar repositories for alv:

Users that are interested in alv are comparing it to the libraries listed below

• KatyBrown / CIAlign
  ☆122Updated 5 months ago
• robotoD / GenoVi
  GenoVi, an automated customizable circular genome visualizer for bacteria and archaea
  ☆86Updated last year
• mpdunne / alan
  Alignment viewer for linux terminal
  ☆117Updated 5 months ago
• althonos / rich-msa
  A Rich renderable for viewing Multiple Sequence Alignments in the terminal.
  ☆78Updated 2 years ago
• kblin / ncbi-acc-download
  Download files from NCBI Entrez by accession
  ☆119Updated 5 months ago
• art-egorov / lovis4u
  Bioinformatics tool for Locus Visualisation
  ☆85Updated 2 weeks ago
• soedinglab / metaeuk
  MetaEuk - sensitive, high-throughput gene discovery and annotation for large-scale eukaryotic metagenomics
  ☆180Updated 7 months ago
• moshi4 / phyTreeViz
  Simple phylogenetic tree visualization python package for phylogenetic analysis
  ☆46Updated 5 months ago
• pirovc / genome_updater
  Bash script to download/update snapshots of files from NCBI genomes repository (refseq/genbank) with track of changes and without redunda…
  ☆150Updated 2 months ago
• ogotoh / spaln
  Genome mapping and spliced alignment of cDNA or amino acid sequences
  ☆100Updated 2 weeks ago
• EddyRivasLab / infernal
  RNA secondary structure/sequence profiles for homology search and alignment
  ☆104Updated 3 months ago
• urmi-21 / orfipy
  Fast and flexible ORF finder
  ☆66Updated 3 years ago
• medema-group / bigslice
  A highly scalable, user-interactive tool for the large scale analysis of Biosynthetic Gene Clusters data
  ☆77Updated 2 months ago
• JLSteenwyk / ClipKIT
  a multiple sequence alignment-trimming algorithm for accurate phylogenomic inference
  ☆69Updated 2 months ago
• DessimozLab / read2tree
  a tool for inferring species tree from sequencing reads
  ☆146Updated this week
• refresh-bio / agc
  Assembled Genomes Compressor
  ☆159Updated 2 months ago
• gem-pasteur / macsyfinder
  MacSyFinder - Detection of macromolecular systems in protein datasets using systems modelling and similarity search.
  ☆57Updated 2 months ago
• steineggerlab / Metabuli
  Metabuli: specific and sensitive metagenomic classification via joint analysis of DNA and amino acid.
  ☆130Updated this week
• salzberg-lab / Balrog
  Bacterial Annotation by Learned Representation of Genes
  ☆54Updated 4 years ago
• althonos / pyrodigal
  Cython bindings and Python interface to Prodigal, an ORF finder for genomes and metagenomes. Now with SIMD!
  ☆147Updated 3 months ago
• shenwei356 / LexicMap
  LexicMap: efficient sequence alignment against millions of prokaryotic genomes
  ☆128Updated this week
• glarue / jgi-query
  A simple command-line tool to download data from Joint Genome Institute databases
  ☆50Updated 2 years ago
• RyanCook94 / inphared
  Providing up-to-date phage genome databases, metrics and useful input files for a number of bioinformatic pipelines.
  ☆66Updated last month
• snayfach / MGV
  Supporting code for uncultivated gut virus manuscript
  ☆68Updated last year
• gamcil / cblaster
  Find clustered hits from a BLAST search
  ☆111Updated 2 months ago
• shenwei356 / perfect-bioinformatic-tools
  What should perfect bioinformatic tools be like?
  ☆106Updated 10 months ago
• takaram / kofam_scan
  CLI tool to annotate genes with KOfam
  ☆75Updated last year
• steineggerlab / conterminator
  Detection of incorrectly labeled sequences across kingdoms
  ☆82Updated 2 years ago
• soedinglab / plass
  sensitive and precise assembly of short sequencing reads
  ☆152Updated 4 months ago
• IndexThePlanet / Logan
  Logan Unitigs and Contigs
  ☆118Updated last week