Nail is an Alignment Inference tooL
☆54Apr 10, 2026Updated 2 weeks ago
Alternatives and similar repositories for nail
Users that are interested in nail are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Optimal distance lower bound k-mer sampling.☆12Jun 19, 2024Updated last year
- A Rust library providing fully dynamic sets of k-mers with high locality☆47Feb 12, 2026Updated 2 months ago
- String algorithm visualizations☆13Feb 7, 2023Updated 3 years ago
- Iterate k-min-mers from a DNA sequence in Rust☆13Apr 8, 2024Updated 2 years ago
- A lightweight platform-accelerated library for biological motif scanning using position weight matrices.☆62Mar 25, 2026Updated last month
- Bare Metal GPUs on DigitalOcean Gradient AI • AdPurpose-built for serious AI teams training foundational models, running large-scale inference, and pushing the boundaries of what's possible.
- Better Alignments with Translated HMMER☆25Apr 8, 2026Updated 3 weeks ago
- Next Index to Query Kmer Intersection☆17Feb 1, 2023Updated 3 years ago
- Align proteins to genomes with splicing and frameshift☆400Jan 5, 2026Updated 3 months ago
- A Pyrodigal extension to predict genes in giant viruses and viruses with alternative genetic code.☆23Nov 25, 2025Updated 5 months ago
- Shared k-mer content between two genomes☆19Jun 21, 2023Updated 2 years ago
- Efficient and fast querying and parsing of GTDB's data☆29Aug 21, 2025Updated 8 months ago
- Universal and efficient structure-based core gene phylogeny with Foldseek and ProstT5☆87Mar 12, 2026Updated last month
- Fasten toolkit, for streaming operations on fastq files☆82Oct 24, 2025Updated 6 months ago
- Rapid & standardized genome annotation using protein structural information☆62Apr 8, 2026Updated 3 weeks ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Parallel Construction of Suffix Arrays in Rust☆26May 2, 2025Updated 11 months ago
- Rust bindings to minimap2 library☆110Mar 30, 2026Updated last month
- Build and deploy cross platform bioinformatic utilities with Rust.☆19Apr 1, 2025Updated last year
- ProphAsm – a rapid computation of simplitigs directly from k-mer sets☆25Feb 17, 2023Updated 3 years ago
- Generation and updating of protein families☆23Mar 13, 2026Updated last month
- Fast and exact gap-affine partial order alignment☆68Updated this week
- Split k-mer analysis – version 2☆105Apr 9, 2026Updated 2 weeks ago
- Rust library for processing sequencing reads.☆25Sep 2, 2024Updated last year
- Wavefront alignment algorithm (WFA) in Golang☆31Jul 26, 2025Updated 9 months ago
- Serverless GPU API endpoints on Runpod - Get Bonus Credits • AdSkip the infrastructure headaches. Auto-scaling, pay-as-you-go, no-ops approach lets you focus on innovating your application.
- A minimal copy fastq and fasta reader built for parallel support and paired end processing☆42Updated this week
- Simulate mutations in genomes☆15Jun 15, 2020Updated 5 years ago
- SIMD-accelerated library for computing global and X-drop affine gap penalty sequence-to-sequence or sequence-to-profile alignments using …☆140Jun 23, 2024Updated last year
- Fast approximate string searching☆119Apr 11, 2026Updated 2 weeks ago
- Fast FASTX parsing and k-mer methods in Rust☆211Apr 20, 2026Updated last week
- ntHash implementation in Rust☆36Jul 12, 2024Updated last year
- a pipeline to cluster proteins into families☆10Apr 1, 2020Updated 6 years ago
- Just another minhash implementation.☆12Mar 12, 2026Updated last month
- PyO3 bindings and Python interface to sylph, an ultrafast method for containment ANI querying and taxonomic profiling.☆21Dec 12, 2024Updated last year
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Fast, robust ANI and aligned fraction for (metagenomic) genomes and contigs.☆249Oct 12, 2025Updated 6 months ago
- An ultrafast and memory efficient tool for phylogenomics☆26Apr 17, 2026Updated last week
- BWT construction and search☆127Jan 14, 2026Updated 3 months ago
- Automated strain separation of low-complexity metagenomes☆52Nov 10, 2021Updated 4 years ago
- Web based viewer for small to medium GFA format files, similar to Bandage☆12Nov 14, 2025Updated 5 months ago
- Alignment against all pre-2019 bacteria on laptops within a few hours (former MOF-Search)☆41Apr 17, 2024Updated 2 years ago
- Building the compacted de Bruijn graph efficiently from references or reads.☆92Feb 26, 2026Updated 2 months ago