Alternatives and similar repositories for mpMap2

Users that are interested in mpMap2 are comparing it to the libraries listed below

• dorolin / rearrvisr
  An R package to detect, classify, and visualize genome rearrangements
  ☆14Updated 4 years ago
• YTLogos / ttplot
  Tao Yan's Plot Toolkit
  ☆12Updated 5 years ago
• augusto-garcia / fullsibQTL
  QTL mapping in outcrossing species using CIM
  ☆10Updated last year
• pblischak / polyploid-genotyping
  SNP genotyping in polyploids
  ☆17Updated 4 years ago
• bcm-uga / pcadapt
  Performing highly efficient genome scans for local adaptation with R package pcadapt v4
  ☆41Updated 9 months ago
• kjgilbert / QstFstComp
  R Package for performing Qst-Fst analyses
  ☆21Updated 7 years ago
• xhhuanglab / QTN_scripts
  ☆9Updated 4 years ago
• StoreyLab / bnpsd
  R package to model and simulate admixed populations
  ☆8Updated last year
• mhoban / haplonet
  R script to plot haplotype networks
  ☆6Updated 3 years ago
• mccoy-lab / hgv_modules
  Teaching modules for Human Genome Variation Lab.
  ☆20Updated 3 weeks ago
• frahik / BMTME
  Bayesian Multi-Trait Multi-Environment for genomic selection[R package] [Dev version]
  ☆18Updated last year
• eblerjana / whatshap-polyphase-experiments
  ☆9Updated 4 years ago
• aprilweilab / picovcf
  Single-header C++ library for fast/low-memory VCF (Variant Call Format) parsing.
  ☆17Updated this week
• yangjl / GERP-diallel
  Research repo for Yang et al., 2017 paper.
  ☆9Updated 5 years ago
• hringbauer / hapROH
  Software to call ROHs
  ☆16Updated 2 months ago
• ComparativeGenomicsToolkit / mafTools
  Bioinformatics tools for dealing with Multiple Alignment Format (MAF) files.
  ☆11Updated 7 months ago
• mskilab-org / pgv
  Pan gGnome Viewer
  ☆10Updated last year
• Zilong-Li / vcfppR
  The fastest VCF/BCF parser in R https://doi.org/10.1093/bioinformatics/btae049
  ☆15Updated this week
• AppliedBioinformatics / Brassica_oleracea_rapa_napus_code
  Code for the Brassica oleracea/rapa/napus genomic comparison
  ☆16Updated 4 years ago
• birneylab / flexlmm
  Flexible linear mixed model framework for Genome Wide Association Studies
  ☆18Updated 3 weeks ago
• chaolongwang / SEEKIN
  SEEKIN: SEquence-based Estimation of KINship
  ☆14Updated 7 years ago
• weissmanlab / magic
  Minimal Assumption Genomic Inference of Coalescence
  ☆14Updated last year
• luntergroup / polyploid
  Benchmarking variant calling in polyploids
  ☆15Updated 3 years ago
• sunnyeesl / BigLD
  ☆21Updated 2 years ago
• lvclark / polyRAD
  Genotype Calling with Uncertainty from Sequencing Data in Polyploids 🍌🍓🥔🍠🥝
  ☆31Updated 3 months ago
• PalamaraLab / ASMC
  Ascertained Sequentially Markovian Coalescent
  ☆16Updated 7 months ago
• martinsikora / admixr
  an R package for admixture analyses
  ☆17Updated 10 years ago
• Gabaldonlab / haplotypo
  This is the Haplotypo repository
  ☆20Updated last year
• Rosemeis / emu
  EM-PCA for Ultra-low Coverage Sequencing Data
  ☆18Updated 5 months ago
• augusto-garcia / onemap
  Repository created to host the R package OneMap: software for constructing genetic maps in experimental crosses: full-sib, RILs, F2 and b…
  ☆38Updated last year