rohan-shah / mpMap2Links
New version of mpMap
☆12Updated 5 years ago
Alternatives and similar repositories for mpMap2
Users that are interested in mpMap2 are comparing it to the libraries listed below
Sorting:
- An R package to detect, classify, and visualize genome rearrangements☆15Updated 5 years ago
- Bayesian Multi-Trait Multi-Environment for genomic selection[R package] [Dev version]☆19Updated 2 years ago
- Single-header C++ library for fast/low-memory VCF (Variant Call Format) parsing.☆17Updated 3 weeks ago
- Tao Yan's Plot Toolkit☆12Updated 6 years ago
- The fastest VCF/BCF parser in R https://doi.org/10.1093/bioinformatics/btae049☆18Updated last week
- QTL mapping in outcrossing species using CIM☆10Updated last year
- FastRemap, a C++ tool for quickly remapping reads between genome assemblies based on the commonly used CrossMap tool. Link to paper: http…☆26Updated 3 years ago
- Kinship (genetic relatedness) using GBS (genotyping-by-sequencing) with Depth adjustment☆21Updated 2 months ago
- a C++ API of htslib to be easily integrated and safely used. More importantly, it can be callled seamlessly in R/Python/Julia etc.☆24Updated 4 months ago
- A comprehensive collection of long inverted repeats in 424 eukaryotic genomes☆16Updated 4 years ago
- ☆16Updated last week
- Interactive eQTL visualizations☆13Updated 3 years ago
- Lossless VCF compression☆21Updated 3 years ago
- Generate HTML report for a set of genomic regions or DESeq2/edgeR results☆10Updated 11 months ago
- SKATE R Utilities☆10Updated last year
- ☆11Updated 2 years ago
- Code repository for the Global Ant Genomics Alliance☆16Updated 6 months ago
- Pan gGnome Viewer☆10Updated 5 months ago
- Using ggtree to Visualize Data on Tree-Like Structure☆25Updated 5 years ago
- Detects human contamination in bam files☆16Updated 5 years ago
- Bioinformatics tools for dealing with Multiple Alignment Format (MAF) files.☆11Updated 5 months ago
- TQSLE v1.0 released☆10Updated 2 years ago
- Performing highly efficient genome scans for local adaptation with R package pcadapt v4☆43Updated 5 months ago
- SNP genotyping in polyploids☆17Updated 5 years ago
- A utility for splitting mixed origin NGS reads☆10Updated 4 years ago
- A nextflow pipeline for analysing expression and splicing in RNA seq data from rare disease patient☆18Updated last month
- ☆13Updated 9 years ago
- Interface to various variant calling formats.☆31Updated last year
- R Package for performing Qst-Fst analyses☆21Updated 8 years ago
- a Shiny/R application to view and annotate copy number variations☆28Updated 2 years ago