Flashiness / METILinks
Morphology-Enhanced Spatial Transcriptome Analysis Integrator
☆25Updated 3 months ago
Alternatives and similar repositories for METI
Users that are interested in METI are comparing it to the libraries listed below
Sorting:
- Modular pipeline for integrated analysis of the tumour microenvironment using multiplex imaging☆13Updated 2 months ago
- ☆11Updated last year
- Cross-modal Identification of Tertiary Lymphoid Structures☆17Updated last year
- A computational tool for identification of 3D multi-modal spatial neighborhoods☆12Updated 5 months ago
- Code for the paper `Multiscale topology classifies and quantifies cell types in subcellular spatial transcriptomics"☆13Updated last year
- Code for spatial subclone paper☆11Updated 5 months ago
- The first computational tool that enables both unsupervised and supervised discovery of tissue spatial domains☆32Updated 3 months ago
- Multimodality Fusion Subtyping (Nature Communications)☆22Updated 2 months ago
- Deciphering tumor ecosystems at super-resolution from spatial transcriptomics with TESLA☆57Updated last year
- The Single-Cell Pathology Landscape of Breast Cancer☆26Updated 5 years ago
- ☆12Updated 4 months ago
- ☆35Updated last month
- Spatial cellular architecture predicts prognosis in glioblastoma - Nature Communications☆25Updated last year
- ☆19Updated 3 years ago
- ☆30Updated 4 months ago
- Code related to Shiao, Gouin III, Ing, et al, Cancer Cell 2023.☆11Updated last year
- ☆18Updated 2 weeks ago
- ☆34Updated last week
- spSeudoMap: cell type mapping of spatial transcriptomics using unmatched single-cell RNA-seq data☆12Updated 9 months ago
- CeLEry: cell location recovery in single-cell RNA sequencing☆35Updated 4 months ago
- ☆34Updated 3 years ago
- ☆11Updated last year
- ☆36Updated last year
- Integrative and Reference-Informed Spatial Domain Detection for Spatial Transcriptomics☆36Updated 5 months ago
- ☆48Updated last month
- CellLENS: Cross-domain information fusion for enhanced cell population delineation in single-cell spatial-omics data☆26Updated last month
- scRNA-seq analysis of EENT-ONB☆22Updated last year
- Scanner of specific spatial patterns in tissues☆13Updated 2 years ago
- Bayesian Analytics for Spatial Segmentation☆30Updated 2 months ago
- Enhancing spatial transcriptomics data by predicting the expression of unmeasured genes from a dissociated scRNA-seq data☆36Updated last year