Flashiness / METI

Related projects ⓘ

Alternatives and complementary repositories for METI

• FrancisCrickInstitute / TRACERx-PHLEX
  Modular pipeline for integrated analysis of the tumour microenvironment using multiplex imaging
  ☆12Updated 4 months ago
• tanlabcode / CytoCommunity
  The first computational tool that enables both unsupervised and supervised discovery of tissue spatial domains
  ☆23Updated 9 months ago
• whwanglab / PDAC
  ☆10Updated 2 years ago
• JiangBioLab / DeepTalk
  Deciphering cell-cell communication from spatially resolved transcriptomic data at single-cell resolution with subgraph-based attentional…
  ☆18Updated 2 months ago
• karthikj89 / humanpdac
  single cell analysis of treatment naive and treated human PDAC
  ☆21Updated 2 years ago
• yunshun / HumanBreast10X
  ☆23Updated 2 years ago
• BodenmillerGroup / SCPathology_publication
  The Single-Cell Pathology Landscape of Breast Cancer
  ☆21Updated 4 years ago
• shenglinmei / ProstateCancerAnalysis
  ☆15Updated last year
• TrigosTeam / SPIAT
  ☆21Updated 2 months ago
• KPMP / Cell-State-Atlas-2022
  Code for a multimodal atlas of healthy and injured cell states and niches in the human kidney
  ☆14Updated 8 months ago
• miccec / GBMstates
  Scripts from the GBM cellular states paper
  ☆18Updated 3 years ago
• YingMa0107 / IRIS
  Integrative and Reference-Informed Spatial Domain Detection for Spatial Transcriptomics
  ☆27Updated 5 months ago
• QihuangZhang / CeLEry
  CeLEry: cell location recovery in single-cell RNA sequencing
  ☆31Updated 6 months ago
• walsh-quail-labs / IMC_Brain
  ☆18Updated last year
• ZhoulabCPH / MVI_HCC
  These are code and scripts for MVI+ HCC scRNA-seq analysis.
  ☆13Updated last year
• Patchouli-M / SequencingCancerFinder
  ☆30Updated 10 months ago
• KramannLab / visium_heart
  Spatial transcriptomics of heart tissue
  ☆17Updated 2 years ago
• guangchunhan / LUAD_Code
  ☆13Updated last year
• sunnyzwu / stromal_subclasses
  code for data processing and visualisation associated with the stromal subclasses manuscript
  ☆11Updated 4 years ago
• immunogenomics / RA_Atlas_CITEseq
  RA Synovial Single-cell Multimodal Cell Atlas
  ☆12Updated 8 months ago
• StatBiomed / SpatialDM
  Spatial direct messaging detected by bivariate Moran
  ☆24Updated last week
• tallulandrews / LiverMap2.0
  ☆14Updated 11 months ago
• jbergenstrahle / STUtility
  ☆47Updated last year
• dyxmvp / Spatial_ATAC-seq
  ☆20Updated last year
• quadbio / organoid_regulomes
  Reproducibility code for the manuscript: 'Inferring and perturbing cell fate regulomes in human cerebral organoids
  ☆25Updated last year
• tiroshlab / Spatial_Glioma
  Code for major analyses in "Integrative spatial analysis reveals a multi-layered organization of glioblastoma" paper
  ☆35Updated 5 months ago
• TencentAILabHealthcare / spatialID
  ☆34Updated 2 years ago
• ventolab / HGDA
  ☆21Updated 5 months ago
• LiHongCSBLab / SOAPy
  ☆14Updated last month
• ma-compbio / GAGE-seq
  Data processing and analysis workflow for GAGE-seq, a coassay of single-cell HiC and single-cell RNA-seq
  ☆11Updated 7 months ago