The official implementation of the ICLR'23 paper PiFold: Toward effective and efficient protein inverse folding.
☆183Jun 17, 2023Updated 3 years ago
Alternatives and similar repositories for PiFold
Users that are interested in PiFold are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- The official implementation of the NeurIPS'23 paper ProteinInvBench: Benchmarking Protein Design on Diverse Tasks, Models, and Metrics☆205Sep 18, 2024Updated 2 years ago
- The official implementation of the ICML'24 paper RFold: Deciphering RNA Secondary Structure Prediction: A Probabilistic K-Rook Matching P…☆88Jul 20, 2024Updated 2 years ago
- The official implementation of the ICLR'24 paper RDesign: Hierarchical Data-efficient Representation Learning for Tertiary Structure-base…☆50Aug 22, 2024Updated 2 years ago
- The official implementation of the ICASSP'2023 paper Global-context aware generative protein design.☆26Feb 21, 2023Updated 3 years ago
- ☆219Sep 24, 2024Updated last year
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- Official implementation of the paper "DiffSDS: A Language Diffusion Model for Protein Backbone Inpainting under Geometric Conditions and …☆14Jun 25, 2023Updated 3 years ago
- Generative Models for Graph-Based Protein Design☆291Dec 24, 2020Updated 5 years ago
- The official implementation of the CVPR'2022 paper Hyperspherical Consistency Regularization.☆29Jun 22, 2022Updated 4 years ago
- ☆118Jan 3, 2026Updated 8 months ago
- ☆14May 25, 2022Updated 4 years ago
- De Novo Protein Design by Equivariantly Diffusing Oriented Residue Clouds☆189Apr 21, 2024Updated 2 years ago
- Structure-conditioned masked language modeling for protein sequence design☆74Jan 31, 2024Updated 2 years ago
- Database of Interacting Protein Structures (DIPS)☆106Jan 26, 2024Updated 2 years ago
- ☆146Jun 3, 2025Updated last year
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- ☆100Oct 15, 2024Updated last year
- Implementation for SE(3) diffusion model with application to protein backbone generation☆424Jul 3, 2023Updated 3 years ago
- Fast protein backbone generation with SE(3) flow matching.☆330Jul 19, 2024Updated 2 years ago
- A comprehensive benchmark on the performances of multiple protein backbone generative models.☆73Aug 4, 2026Updated last month
- Sidechain conditioning and modeling for full-atom protein sequence design☆150Nov 11, 2025Updated 10 months ago
- Official repository for the paper "Tranception: Protein Fitness Prediction with Autoregressive Transformers and Inference-time Retrieval"☆170Aug 24, 2023Updated 3 years ago
- This repo contains the codes for our paper "End-to-End Full-Atom Antibody Design"☆135Feb 26, 2025Updated last year
- ✌🏻 Antigen-Specific Antibody Design and Optimization with Diffusion-Based Generative Models for Protein Structures (NeurIPS 2022)☆370Jun 29, 2023Updated 3 years ago
- GearNet and Geometric Pretraining Methods for Protein Structure Representation Learning, ICLR'2023 (https://arxiv.org/abs/2203.06125)☆331Jun 13, 2025Updated last year
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- Joint sequence and structure generation with RoseTTAFold sequence space diffusion☆332Oct 28, 2024Updated last year
- ☆214Apr 21, 2025Updated last year
- Graph Denoising Diffusion for Inverse Protein Folding(NeurIPS 2023)☆74May 20, 2026Updated 3 months ago
- The official implementation of the CVPR'22 paper SimVP: Simpler Yet Better Video Prediction.☆303Feb 21, 2023Updated 3 years ago
- List of papers about Proteins Design using Deep Learning☆1,976Aug 15, 2026Updated last month
- Codebase of the paper "Str2Str: A Score-based Framework for Zero-shot Protein Conformation Sampling" (ICLR 2024)☆88Apr 21, 2026Updated 4 months ago
- Code for the ProteinMPNN paper☆1,854Aug 14, 2024Updated 2 years ago
- The official implementation of the paper "MotifRetro: Exploring the Combinability-Consistency Trade-offs in retrosynthesis via Dynamic Mo…☆11Jun 25, 2023Updated 3 years ago
- RoseTTAFold2 protein/nucleic acid complex prediction☆380Jun 3, 2024Updated 2 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Fast, accurate antibody structure prediction from deep learning on massive set of natural antibodies☆431Sep 9, 2026Updated last week
- Code and Pre-Trained Models for "AttnPacker: An end-to-end deep learning method for protein side-chain packing"☆96Dec 29, 2023Updated 2 years ago
- Diffusion models of protein structure; trigonometry and attention are all you need!☆568Sep 9, 2026Updated last week
- ☆30Apr 2, 2026Updated 5 months ago
- Protein hallucination and inpainting with RoseTTAFold☆285Mar 30, 2023Updated 3 years ago
- Using Rotamer Interaction Fields from RIFGen/Dock in python☆17May 2, 2021Updated 5 years ago
- Code for ColabDock paper☆158May 1, 2025Updated last year