βπ» Antigen-Specific Antibody Design and Optimization with Diffusion-Based Generative Models for Protein Structures (NeurIPS 2022)
β359Jun 29, 2023Updated 2 years ago
Alternatives and similar repositories for diffab
Users that are interested in diffab are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- This repo contains the codes for our paper "End-to-End Full-Atom Antibody Design"β129Feb 26, 2025Updated last year
- Fast, accurate antibody structure prediction from deep learning on massive set of natural antibodiesβ414Sep 3, 2023Updated 2 years ago
- β109Apr 1, 2023Updated 3 years ago
- This repo contains the codes for our paper Conditional Antibody Design as 3D Equivariant Graph Translation.β105Apr 7, 2023Updated 3 years ago
- β136Aug 8, 2024Updated last year
- Proton VPN Special Offer - Get 70% off β’ AdSpecial partner offer. Trusted by over 100 million users worldwide. Tested, Approved and Recommended by Experts.
- Implementation for SE(3) diffusion model with application to protein backbone generationβ418Jul 3, 2023Updated 2 years ago
- Official implementation of Generative Diffusion Models for Antibody Design, Docking, and Optimization.β61Oct 25, 2023Updated 2 years ago
- Improved antibody structure-based design using inverse foldingβ159Dec 9, 2025Updated 4 months ago
- β130Sep 5, 2022Updated 3 years ago
- Guiding diffusion models for antibody sequence and structure co-design with developability properties.β37Nov 7, 2024Updated last year
- Efficient evolution from protein language modelsβ223Aug 26, 2023Updated 2 years ago
- Diffusion models of protein structure; trigonometry and attention are all you need!β567Dec 12, 2023Updated 2 years ago
- Code for the ProteinMPNN paperβ1,706Aug 14, 2024Updated last year
- Generative Language Modeling for Antibody Designβ188Oct 5, 2024Updated last year
- Managed hosting for WordPress and PHP on Cloudways β’ AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- BioPhi is an open-source antibody design platform. It features methods for automated antibody humanization (Sapiens), humanness evaluatioβ¦β239May 13, 2025Updated 11 months ago
- Unconstrained lattice antibody-antigen bindings generatorβ112Nov 16, 2025Updated 5 months ago
- Implementation of DiffDock-PP: Rigid Protein-Protein Docking with Diffusion Models in PyTorch (ICLR 2023 - MLDD Workshop)β235Dec 29, 2023Updated 2 years ago
- open source repositoryβ148Nov 30, 2023Updated 2 years ago
- De Novo Protein Design by Equivariantly Diffusing Oriented Residue Cloudsβ186Apr 21, 2024Updated 2 years ago
- AbLang: A language model for antibodiesβ163Sep 22, 2023Updated 2 years ago
- DockQ is a single continuous quality measure for Protein, Nucleic Acids and Small Molecule Docking Modelsβ385Feb 26, 2026Updated 2 months ago
- Rotamer Density Estimator is an Unsupervised Learner of the Effect of Mutations on Protein-Protein Interaction (ICLR 2023)β63Jun 17, 2024Updated last year
- The official implementation of DiffAbXL benchmarked in the paper "Exploring Log-Likelihood Scores for Ranking Antibody Sequence Designs",β¦β93Jun 11, 2025Updated 10 months ago
- Managed Kubernetes at scale on DigitalOcean β’ AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- Predict the structure of immune receptor proteinsβ181Nov 11, 2025Updated 5 months ago
- Fast protein backbone generation with SE(3) flow matching.β324Jul 19, 2024Updated last year
- List of papers about Proteins Design using Deep Learningβ1,923Updated this week
- Diffusion-based all-atom protein generative model.β235Aug 27, 2025Updated 8 months ago
- Code for running RFdiffusionβ2,849Updated this week
- Making Protein Design accessible to all via Google Colab!β909Apr 6, 2026Updated 3 weeks ago
- Machine learning-driven antibody designβ63Jul 5, 2023Updated 2 years ago
- This is the official repository of paper - GeoAB: Towards Realistic Antibody Design and Reliable Affinity Maturation (ICML2024)β43Jun 17, 2024Updated last year
- Deep learning models and structure realization scripts for the DeepAb antibody structure prediction method.β174Nov 30, 2022Updated 3 years ago
- GPU virtual machines on DigitalOcean Gradient AI β’ AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- A generative model for programmable protein designβ813Apr 11, 2024Updated 2 years ago
- Convenience Python APIs for antibody numbering using ANARCIβ123May 19, 2025Updated 11 months ago
- Protein Design with Guided Discrete Diffusionβ141Feb 21, 2024Updated 2 years ago
- Full-Atom Peptide Design based on Multi-modal Flow Matching (ICML 2024)β103May 25, 2025Updated 11 months ago
- Antibody Numbering and Antigen Receptor ClassIficationβ272May 21, 2024Updated last year
- Implementation of the DDPM + IPA (invariant point attention) for protein generation, as outlined in the paper "Protein Structure and Sequβ¦β89Jul 25, 2022Updated 3 years ago
- Joint sequence and structure generation with RoseTTAFold sequence space diffusionβ333Oct 28, 2024Updated last year