☆21Jul 28, 2025Updated last year
Alternatives and similar repositories for AutoPM3
Users that are interested in AutoPM3 are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆99Apr 3, 2026Updated 4 months ago
- Pangolin is a deep-learning method for predicting splice site strengths.☆95Jun 17, 2024Updated 2 years ago
- ☆29Aug 25, 2025Updated 11 months ago
- This is the official development repository for BaseVar, which call variants for large-scale ultra low-pass (<1.0x) WGS data, especially …☆28May 28, 2026Updated 2 months ago
- An online database of variants functionally demonstrated to affect (or not affect) splicing.☆12Jul 7, 2026Updated last month
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- ☆17Oct 17, 2024Updated last year
- A pipeline for the identification of Compound Heterozygous Variants☆10Nov 10, 2022Updated 3 years ago
- ☆27Mar 2, 2026Updated 5 months ago
- SpliceTransformer(SpTransformer) is a deep learning tool to predict tissue specific splicing site from pre-mRNA sequence☆35Nov 22, 2024Updated last year
- Interactive table from gemini output☆10Mar 5, 2019Updated 7 years ago
- Seave is a web platform that enables genetic variants to be easily filtered and annotated with in silico pathogenicity prediction scores …☆17Aug 9, 2018Updated 8 years ago
- Fast, accurate and simple to use command line tool for variant detection in NGS data.☆14Sep 3, 2019Updated 6 years ago
- MegaPath-Nano: Accurate Compositional Analysis and Drug-level Antimicrobial Resistance Detection Software for Oxford Nanopore Long-read M…☆13Jul 2, 2022Updated 4 years ago
- SANEFALCON (Single reAds Nucleosome-basEd FetAL fraCtiON): Calculating the fetal fraction for noninvasive prenatal testing based on genom…☆14Jun 5, 2020Updated 6 years ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- BAMixChecker: A fast and efficient tool for sample matching checkup☆16Jun 12, 2022Updated 4 years ago
- Advanced plotting functions for CNV data generated by CNV-Seq and Control Freec☆13Aug 25, 2020Updated 5 years ago
- Predicting oncogenic potential of gene fusions☆12Feb 13, 2016Updated 10 years ago
- A tool for diagnosing SMA in exome, genome or targeted sequencing data☆13Jul 1, 2026Updated last month
- ☆24May 16, 2023Updated 3 years ago
- ☆76Mar 13, 2026Updated 5 months ago
- Population-wide Deletion Calling☆35Apr 16, 2025Updated last year
- ☆19Mar 14, 2022Updated 4 years ago
- Allele frequency filtering for Mendelian variant discovery☆18Sep 27, 2016Updated 9 years ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- Accessing AlphaMissense Data Resources in R☆13Nov 26, 2025Updated 8 months ago
- A visualization tool for Systems-Level Interactive Data Exploration☆12Jan 12, 2022Updated 4 years ago
- MrMosaic (Genomic Mosaic Structural Variant Caller)☆15Jul 21, 2017Updated 9 years ago
- Automatic classification of sequence variants and CNVs according to ACMG criteria.☆33Sep 30, 2024Updated last year
- Tissue-specific variant effect predictions on splicing☆44May 23, 2023Updated 3 years ago
- An HLA star-calling tool for PacBio HiFi data types☆23Feb 26, 2025Updated last year
- ☆19Updated this week
- extract SV signal from a BAM☆10Jul 26, 2018Updated 8 years ago
- Short reads aligner for NIPT/CNV☆16Oct 10, 2018Updated 7 years ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- Interpretable, protein structure-based prediction of missense variant deleteriousness.☆23Aug 6, 2025Updated last year
- Website for checking the SpliceAI, Pangolin, and other predictor scores for variant(s) of interest.☆34Updated this week
- Clinical Variant Annotation Pipeline☆10Apr 21, 2020Updated 6 years ago
- Ximmer is a system for CNV calling on exome and targeted genomic sequencing☆19Jun 13, 2026Updated 2 months ago
- ☆15Jan 19, 2018Updated 8 years ago
- a C++ API of htslib to be easily integrated and safely used. More importantly, it can be callled seamlessly in R/Python/Julia etc.☆26Jun 7, 2026Updated 2 months ago
- Streamlined duo/trio analysis and pedigree haplotyping: from VCF to interactive HTML☆15Oct 30, 2024Updated last year