☆21Jul 28, 2025Updated last year
Alternatives and similar repositories for AutoPM3
Users that are interested in AutoPM3 are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆12Aug 20, 2025Updated last year
- ☆19Mar 14, 2022Updated 4 years ago
- ☆109Apr 3, 2026Updated 6 months ago
- This is the official development repository for BaseVar, which call variants for large-scale ultra low-pass (<1.0x) WGS data, especially …☆28May 28, 2026Updated 5 months ago
- Pangolin is a deep-learning method for predicting splice site strengths.☆97Jun 17, 2024Updated 2 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Allele frequency filter app☆15May 4, 2022Updated 4 years ago
- CytoGenetic Pattern Sleuth (CytoGPS) is a software tool to parse semi-structured ISCN-based karyotypes in text formats. This Java-based s…☆11Aug 31, 2021Updated 5 years ago
- ☆11Apr 25, 2024Updated 2 years ago
- Svirlpool: structural variant detection from long read sequencing by local assembly☆10Oct 11, 2026Updated 3 weeks ago
- ☆28Sep 18, 2026Updated last month
- Automatic classification of sequence variants and CNVs according to ACMG criteria.☆34Sep 30, 2024Updated 2 years ago
- ☆17Oct 17, 2024Updated 2 years ago
- for visual evaluation of read support for structural variation☆56Jun 4, 2024Updated 2 years ago
- Interactive table from gemini output☆10Mar 5, 2019Updated 7 years ago
- End-to-end encrypted cloud storage - Proton Drive • AdSpecial offer: 40% Off Yearly / 80% Off First Month. Protect your most important files, photos, and documents from prying eyes.
- Rust-based bm3d algorithm for ring artifact removal in normalized sinogram with Python Bindings☆13Updated this week
- MegaPath-Nano: Accurate Compositional Analysis and Drug-level Antimicrobial Resistance Detection Software for Oxford Nanopore Long-read M…☆14Jul 2, 2022Updated 4 years ago
- Report generator for Chanjo output☆10Jun 5, 2024Updated 2 years ago
- Seave is a web platform that enables genetic variants to be easily filtered and annotated with in silico pathogenicity prediction scores …☆17Aug 9, 2018Updated 8 years ago
- An online database of variants functionally demonstrated to affect (or not affect) splicing.☆14Sep 22, 2026Updated last month
- A tool for diagnosing SMA in exome, genome or targeted sequencing data☆14Jul 1, 2026Updated 4 months ago
- Fast, accurate and simple to use command line tool for variant detection in NGS data.☆14Sep 3, 2019Updated 7 years ago
- An R interface to the GTEx Portal API☆13Aug 19, 2025Updated last year
- Advanced plotting functions for CNV data generated by CNV-Seq and Control Freec☆13Aug 25, 2020Updated 6 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Shiny ClinVar web server source code☆13Apr 29, 2019Updated 7 years ago
- SANEFALCON (Single reAds Nucleosome-basEd FetAL fraCtiON): Calculating the fetal fraction for noninvasive prenatal testing based on genom…☆14Jun 5, 2020Updated 6 years ago
- RAPTR-SV uses Read Pair and Split Read methods to identify structural variants in paired-end WGS data☆10Aug 18, 2016Updated 10 years ago
- ☆49Oct 11, 2026Updated 3 weeks ago
- a C++ API of htslib to be easily integrated and safely used. More importantly, it can be callled seamlessly in R/Python/Julia etc.☆28Jun 7, 2026Updated 4 months ago
- Functional-trained variant effect predictor☆18Aug 27, 2026Updated 2 months ago
- Population-wide Deletion Calling☆35Apr 16, 2025Updated last year
- A visualization tool for Systems-Level Interactive Data Exploration☆13Jan 12, 2022Updated 4 years ago
- ☆10Oct 21, 2019Updated 7 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- ☆25May 16, 2023Updated 3 years ago
- A modular, LLM-agnostic fullstack agent framework.☆13Jul 21, 2025Updated last year
- MrMosaic (Genomic Mosaic Structural Variant Caller)☆15Jul 21, 2017Updated 9 years ago
- Predicting oncogenic potential of gene fusions☆12Feb 13, 2016Updated 10 years ago
- ☆76Mar 13, 2026Updated 7 months ago
- An HLA star-calling tool for PacBio HiFi data types☆23Feb 26, 2025Updated last year
- BAMixChecker: A fast and efficient tool for sample matching checkup☆16Jun 12, 2022Updated 4 years ago