Xinglab / rMATS-longLinks
☆34Updated 2 months ago
Alternatives and similar repositories for rMATS-long
Users that are interested in rMATS-long are comparing it to the libraries listed below
Sorting:
- SingleCell Nanopore sequencing data analysis☆63Updated 8 months ago
- ☆13Updated 3 years ago
- Alternative polyadenylation detection from diverse data sources such as 3'-seq, long-read and short-reads.☆34Updated 2 years ago
- Long read to rMATS☆32Updated 2 years ago
- SpliceWiz is an R package for exploring differential alternative splicing events in splice-aware alignment BAM files.☆21Updated last month
- R package: TopDom - An efficient and Deterministic Method for identifying Topological Domains in Genomes☆21Updated 2 years ago
- A comprehensive toolkit for mutational signature analysis☆41Updated last year
- ☆23Updated 4 years ago
- Workflow for Sequenza, cellularity and ploidy☆26Updated 5 months ago
- ☆20Updated 3 years ago
- TEProf2 Pipeline used to find promoters and predict protein sequences from RNA-sequencing data☆27Updated 2 years ago
- ☆17Updated last year
- single-cell-Isoform-Sequencing-Analysis-Tools: New and powerful tools brings single-cell RNA sequencing to the Isoform level and single m…☆26Updated last year
- Single-Cell Omics for Transcriptome CHaracterization (SCOTCH): isoform-level characterization of gene expression through long-read single…☆18Updated 3 weeks ago
- SCAN2 is a somatic SNV and indel genotyper for single cells amplified by Primary Template-Directed Amplification (PTA)☆17Updated 6 months ago
- A R script to perform clustering of gene expression time-series RNA-seq data with Mfuzz.☆23Updated 6 years ago
- ☆15Updated 3 years ago
- Pipeline to analyze long-read mRNA isoforms and ORF products sequenced in breast cancer using PacBio Single-Molecule technology.☆16Updated 3 years ago
- CellPhy: accurate and fast probabilistic inference of single-cell phylogenies☆20Updated 3 weeks ago
- ☆24Updated last year
- Motif manipulation functions for R.☆30Updated 4 months ago
- ☆38Updated 2 years ago
- RepEnrich2 is an updated method to estimate repetitive element enrichment using high-throughput sequencing data.☆41Updated 3 years ago
- Micro DNA identification☆23Updated 4 years ago
- HiC for copy Number variation and Translocation detection☆41Updated 4 years ago
- EasyFuse is a pipeline for accurate fusion gene detection from RNA-seq data.☆64Updated 2 weeks ago
- ☆23Updated 11 months ago
- ☆37Updated 6 years ago
- RNA-seq workflow: differential transcript usage☆23Updated 2 years ago
- an R/Shiny application for interactive creation of non-circular plots of whole genomes☆45Updated 8 months ago