Xinglab / rMATS-longLinks
☆28Updated 7 months ago
Alternatives and similar repositories for rMATS-long
Users that are interested in rMATS-long are comparing it to the libraries listed below
Sorting:
- ☆23Updated 4 years ago
- SingleCell Nanopore sequencing data analysis☆60Updated last month
- Workflow for Sequenza, cellularity and ploidy☆19Updated last month
- Alternative polyadenylation detection from diverse data sources such as 3'-seq, long-read and short-reads.☆31Updated last year
- Main repository for Drews et al. (Nature, 2022)☆42Updated last year
- ☆17Updated 11 months ago
- ☆13Updated 2 years ago
- Isoform co-usage networks from single-cell RNA-seq data☆16Updated last year
- HiC for copy Number variation and Translocation detection☆39Updated 3 years ago
- RepEnrich2 is an updated method to estimate repetitive element enrichment using high-throughput sequencing data.☆39Updated 3 years ago
- An R package for predicting HR deficiency from mutation contexts☆28Updated 5 months ago
- A p-value-free method for controlling false discovery rates in high-throughput biological data with two conditions☆39Updated 3 years ago
- Single-cell/nuclei pipeline for data derived from Oxford Nanopore and 10X Genomics☆42Updated last week
- Annotation and segmentation of MAS-seq data☆20Updated 2 years ago
- SQUID detects both fusion-gene and non-fusion-gene structural variations from RNA-seq data☆42Updated 3 years ago
- ☆23Updated 6 months ago
- ☆22Updated 4 months ago
- RNA-seq workflow: differential transcript usage☆22Updated last year
- a set of NGS pipelines☆24Updated last week
- ☆15Updated 2 years ago
- Statistically Significant loops from HiChIP data☆43Updated last year
- Pipeline to analyze long-read mRNA isoforms and ORF products sequenced in breast cancer using PacBio Single-Molecule technology.☆16Updated 3 years ago
- R package: TopDom - An efficient and Deterministic Method for identifying Topological Domains in Genomes☆21Updated 2 years ago
- Isoform-level functional RNA-Seq analysis 🧬☆25Updated last month
- TEProf2 Pipeline used to find promoters and predict protein sequences from RNA-sequencing data☆26Updated 2 years ago
- ☆19Updated 2 years ago
- Identifying differentially methylated regions from MethylC-seq (bisulfite-sequencing) data☆28Updated 2 years ago
- Abismal is a mapper of FASTQ bisulfite-converted short reads (between 50 and 1000 bases) to a FASTA reference genome.☆18Updated last week
- Flexible and efficient parsing, interpreting and editing of sequencing reads☆43Updated last month
- ☆18Updated 3 years ago