madhavmantri / chicken_heartLinks
Spatiotemporal single-cell RNA sequencing of developing hearts reveals interplay between cellular differentiation and morphogenesis
☆13Updated last year
Alternatives and similar repositories for chicken_heart
Users that are interested in chicken_heart are comparing it to the libraries listed below
Sorting:
- Mosaic single cell data integration using non-overlapping features☆37Updated 2 years ago
- FastIntegrate integrates thousands of scRNA-seq datasets and outputs batch-corrected values for downstream analysis☆23Updated 9 months ago
- A manually curated database of literature-supported ligand-receptor interactions in human and mouse☆31Updated last year
- A record of the analysis pipelines used to create the HTAPP data☆33Updated 3 months ago
- Computational pipeline to process EasySci-RNA data.☆21Updated last year
- ☆15Updated 3 years ago
- Implementation of MaSigPro for scRNA-Seq Data☆14Updated last year
- ☆9Updated last year
- RNA-velocity informed embeddings for visualizing cellular trajectories☆44Updated 2 years ago
- R package for Bioconductor submission☆35Updated 2 years ago
- NicheDE is a method that detects context dependent changes in gene expression in spatial transcriptomic data.☆20Updated 2 months ago
- ☆23Updated 2 years ago
- Repository for scRNAseq study of human kidneys☆15Updated 6 years ago
- Bi-order integration (in silico multi-omics data) of single cell RNA sequencing, single cell ATAC sequencing, spacial transcriptomics and…☆36Updated last year
- NATMI: Network Analysis Toolkit for the Multicellular Interactions☆35Updated 4 years ago
- R package for detection of cell-cell interaction using Non-negative Tensor Decomposition☆34Updated last month
- Reproducibility code for the manuscript: 'Inferring and perturbing cell fate regulomes in human cerebral organoids☆28Updated 2 years ago
- Lung cancer 10X analysis☆11Updated 4 years ago
- ☆55Updated last year
- ☆10Updated 2 years ago
- ☆29Updated 3 months ago
- R package gathering a set of wrappers to apply various integration methods to Seurat objects (and rate such methods)☆31Updated 2 months ago
- STRIDE (Spatial TRanscRIptomics DEconvolution by topic modelling) is a cell-type deconvolution tool for spatial transcriptomics by using …☆26Updated last year
- R package IReNA☆28Updated 8 months ago
- Spatial transcriptomics of heart tissue☆22Updated 3 years ago
- Epigenetic cell-type deconvolution from Single-Cell Omic Reference profiles☆33Updated 4 months ago
- ☆18Updated 2 years ago
- Independent Component Analysis decipher functional modules for better cell clustering and annotation☆16Updated 3 years ago
- ☆16Updated 4 years ago
- ☆52Updated 2 years ago