Alternatives and similar repositories for SANGO

Users that are interested in SANGO are comparing it to the libraries listed below

• WanluLiuLab / scAtlasVAE
  ☆40Updated 5 months ago
• ejarmand / comparative_epigenomic_motor_cortex
  ☆10Updated last year
• GreenleafLab / scScalpChromatin
  ☆31Updated 2 years ago
• ChengxiangQiu / tome_code
  The scripts used for the analyses in TOME project
  ☆25Updated 3 weeks ago
• KellisLab / AD_regulome_analysis
  AD regulome analysis
  ☆14Updated 2 years ago
• getzlab / CPTAC_PanCan_PTM_2023
  ☆17Updated 2 years ago
• RubD / Giotto
  Spatial omics analysis toolbox
  ☆18Updated last year
• inmybrain / SClineager
  SClineager: a Bayesian hierarchical model that performs lineage tracing of single cells based on genetic markers
  ☆10Updated last year
• haoshijie13 / LISTA
  Codes used in LISTA project.
  ☆14Updated last year
• kaizhang / single-cell-benchmark
  ☆11Updated 2 years ago
• zakieh-tayyebi / CellSpace
  Scalable sequence-informed embedding of single-cell ATAC-seq data with CellSpace
  ☆41Updated 11 months ago
• McGranahanLab / ImmuneLENS
  ☆15Updated 9 months ago
• buenrostrolab / PRINT
  ☆20Updated last week
• jeongdo801 / scNOVA
  scNOVA : Single-Cell Nucleosome Occupancy and genetic Variation Analysis
  ☆11Updated 2 years ago
• aristoteleo / spateo-tutorials
  tutorials for spateo package
  ☆20Updated 11 months ago
• jiang-junyao / IReNA
  R package IReNA
  ☆28Updated last year
• kunwang34 / PhyloVelo
  PhyloVelo, Phylogeny-based transcriptomic velocity of single cells
  ☆43Updated 3 months ago
• xmuhuanglab / eNet
  ☆12Updated 2 years ago
• RebuffetLucas / Meta_NK_Project
  ☆11Updated 5 months ago
• JunyueCaoLab / EasySci
  Computational pipeline to process EasySci-RNA data.
  ☆22Updated last year
• wenweixiong / MARVEL
  ☆52Updated last year
• di-0579 / Spatial_epigenome-transcriptome_co-sequencing
  ☆33Updated 2 years ago
• xryanglab / SCASL
  single-cell clustering based on alternative splicing landscapes
  ☆23Updated last year
• bodegalab / irescue
  Uncertainty-aware quantification of Transposable Elements expression in scRNA-seq
  ☆20Updated this week
• KlugerLab / GeneTrajectory-python
  Python implementation of Gene Trajectory
  ☆30Updated last year
• mcgilldinglab / UNAGI
  UNAGI: deep generative AI for virtual disease and unsuperivsed in-silico perturbations.
  ☆45Updated this week
• Coolgenome / PDAC
  ☆24Updated 10 months ago
• dbrg77 / scATAC_snakemake
  Snakemake pipeline for plate scATAC-seq processing
  ☆26Updated 2 years ago
• Teichlab / snp2cell
  cell type specific, trait-associated gene regulation
  ☆29Updated 8 months ago
• mcgilldinglab / MATES
  A Deep Learning-Based Model for Quantifying Transposable Elements in Single-Cell Sequencing Data
  ☆32Updated last week