dosorio / SCORPION
Supplementary information for "Population-level comparisons of gene regulatory networks modeled on high-throughput single-cell transcriptomic data"
☆9Updated last year
Alternatives and similar repositories for SCORPION:
Users that are interested in SCORPION are comparing it to the libraries listed below
- Deconvolution of spatial transcriptomics at single-cell resolution☆17Updated 7 months ago
- Human brain, >200,000 nuclei☆24Updated 3 years ago
- Human Endometrial Cell Atlas (HECA). An integrated single-cell reference atlas of the human endometrium.☆24Updated 10 months ago
- BulkSignalR☆18Updated 3 weeks ago
- ☆17Updated last year
- Collection of functions created and/or curated to aid in the visualization and analysis of single-cell data using R.☆16Updated 3 years ago
- FastIntegrate integrates thousands of scRNA-seq datasets and outputs batch-corrected values for downstream analysis☆23Updated 5 months ago
- ☆13Updated 7 years ago
- Gene Expression Decomposition and Integration☆18Updated 2 months ago
- Functional Annotation for Single-Cell Transcriptomics☆10Updated 9 months ago
- ☆9Updated 7 years ago
- Waelchli-lab / Single-cell-atlas-of-the-human-brain-vasculature-accross-development-adulthood-and-diseaseMolecular atlas of the human brain vasculature accross development, adulthood and disease at the single-cell level☆11Updated 9 months ago
- R tools for analysis and visualization of single-cell subclustering data☆16Updated 11 months ago
- ☆16Updated 4 years ago
- An R package for visualising cell-cell interactions☆44Updated 8 months ago
- The R package scCODE, a platform for data-specific DE gene detection for scRNA-seq data☆13Updated last year
- Querying cellular states and programs by learning representations of gene sets☆12Updated 9 months ago
- Lung cancer 10X analysis☆11Updated 4 years ago
- cell type deconvolution for multi-condition bulk RNA-seq data☆24Updated 3 years ago
- Implements *CellAnnotator (aka *CAT/starCAT), annotating scRNA-Seq with predefined gene expression programs☆22Updated 2 months ago
- Example of run CytoSig and reproduce prediction results on bulk and single-cell cohorts☆12Updated last year
- Custom codes accompanying single cell spatial transcriptomic study on the healthy human lung☆12Updated last year
- ☆16Updated 2 years ago
- Implementation of MaSigPro for scRNA-Seq Data☆14Updated 8 months ago
- corto (Correlation Tool): an R package to generate correlation-based DPI networks☆20Updated 2 years ago
- R package for SIGMA, a clusterability measure for scRNA-seq data☆12Updated 3 years ago
- Tumour Heterogeneity and Intercellular Networks of Nasopharyngeal Carcinoma at Single Cell Resolution☆10Updated 2 years ago
- R package for Flexible dot plots☆29Updated 2 years ago
- Analysis cell-type-specific functional gene network, with SCINET and HumanNetv3☆41Updated last year
- ☆24Updated 2 years ago