dosorio / SCORPIONLinks
Supplementary information for "Population-level comparisons of gene regulatory networks modeled on high-throughput single-cell transcriptomic data"
☆11Updated 2 years ago
Alternatives and similar repositories for SCORPION
Users that are interested in SCORPION are comparing it to the libraries listed below
Sorting:
- 🐯 tigeR: Tumor Immunotherapy Gene Expression Data Analysis R package☆54Updated 2 weeks ago
- An R package for visualising cell-cell interactions☆46Updated last year
- ☆22Updated 2 years ago
- Calculate NEPC risk score from bulk transcriptome data or single-cell RNA-seq for prostate cancer☆16Updated last year
- Deconvolution of spatial transcriptomics at single-cell resolution☆20Updated last year
- R tools for analysis and visualization of single-cell subclustering data☆17Updated 4 months ago
- Network construction Algorithm☆22Updated last year
- FastIntegrate integrates thousands of scRNA-seq datasets and outputs batch-corrected values for downstream analysis☆23Updated last year
- ☆13Updated 8 years ago
- ☆18Updated 4 years ago
- Hierarchical Cell Annotation☆26Updated last year
- A manually curated database of literature-supported ligand-receptor interactions in human and mouse☆32Updated last year
- R package developed for single-cell RNA-seq analysis. It was designed using the Seurat framework, and offers existing and novel single-ce…☆33Updated 2 months ago
- The R package scCODE, a platform for data-specific DE gene detection for scRNA-seq data☆14Updated 2 years ago
- Querying cellular states and programs by learning representations of gene sets☆15Updated 3 months ago
- GEfetch2R - Access Single-cell/Bulk RNA-seq Data from Public Repositories and Benchmark the Subsequent Format Conversion Tools☆39Updated last week
- ☆17Updated 2 years ago
- Human Endometrial Cell Atlas (HECA). An integrated single-cell reference atlas of the human endometrium.☆30Updated last year
- simpler single cell RNAseq data Visualization☆10Updated 11 months ago
- Hierarchical annotation of immune cells n scRNA-Seq data based on ssGSEA algorithm.☆10Updated last year
- Single-cell Mutual Information-based Network Engineering Ranger☆22Updated 5 months ago
- Repository for scRNAseq study of human kidneys☆15Updated 6 years ago
- BulkSignalR☆26Updated 6 months ago
- R package expanding integrative analysis capabilities of Seurat by providing seamless access to popular integration methods and to an int…☆31Updated 5 months ago
- Robust identification of perturbed cell types in single-cell RNA-seq data☆36Updated 2 months ago
- ☆62Updated 2 years ago
- Functional Annotation for Single-Cell Transcriptomics☆11Updated last year
- Code used to process the data of the HBCA project☆32Updated last year
- fastCNV R package to detect putative CNVs in single cell and spatial transcriptomics data☆38Updated last week
- Lung cancer 10X analysis☆11Updated 5 years ago