Bioconductor / ExperimentHub
Client to access ExperimentHub resources
☆10Updated 3 weeks ago
Alternatives and similar repositories for ExperimentHub
Users that are interested in ExperimentHub are comparing it to the libraries listed below
Sorting:
- Code for EpiMap data browser☆14Updated 11 months ago
- A Shiny web server for interactive visualization and analysis of RNA-seq data☆23Updated 4 years ago
- R/Bioconductor package to interactively explore single cell clusters at multiple resolutions☆10Updated 3 years ago
- CellR: single-cell RNA-Seq guided deconvolution of cellular composition from bulk-tissue RNA-Seq☆18Updated 3 years ago
- Workflow for ZINB-WaVE + DESeq2 intergration for single-cell RNA-seq☆31Updated 4 years ago
- A Package For Predicting The Disruptiveness Of Single Nucleotide Polymorphisms On Transcription Factor Binding Sites.☆29Updated 9 months ago
- ☆12Updated 11 months ago
- 🧬 🦀 A fast and efficient tool to perform a genome wide Single cell Chromatin State Analysis using multimodal histone modification data.…☆28Updated 3 years ago
- The official repository of the Bioconductor 2019 Conference Workshops☆25Updated 2 years ago
- An R package for multi-dimensional pathway enrichment analysis☆16Updated 3 weeks ago
- This repository contains HCA Benchmarking codes☆26Updated 5 years ago
- R vignettes for processing BUS format single-cell RNA-seq files☆20Updated 5 years ago
- Software Package for Transcription Factor Binding Site (TFBS) Analysis☆28Updated 2 months ago
- Differential ATAC-seq toolkit☆27Updated last year
- Cell type purification by single-cell transcriptome-trained sorting☆14Updated 5 years ago
- Multi-omic Integration and Analysis of cBioPortal and TCGA data with MultiAssayExperiment☆20Updated last year
- Single nucleotide variant (SNV) detection and genotyping algorithm for single-cell DNA sequencing data☆11Updated 5 years ago
- Create QC and summary reports for Alevin output☆32Updated 3 weeks ago
- Bead-based single-cell atac processing☆33Updated 3 years ago
- processes GoT amplicon data and generates a table of metrics☆29Updated 2 years ago
- Collection of functions created and/or curated to aid in the visualization and analysis of single-cell data using R.☆16Updated 3 years ago
- ☆17Updated 11 months ago
- Workflow for the Association of T-cell receptors from 3' single-cell RNA-seq (WAT3R)☆21Updated 2 years ago
- Single cell interactive plotting tools☆23Updated 4 years ago
- Gene-level general linear mixed model☆21Updated 3 months ago
- Running NGS computing demanding applications, e.g reads mapping and counting, wrapped in docker containers.☆25Updated last month
- Bioinformatics for Benched Biologists☆22Updated 5 years ago
- Isoform-level expression patterns in single-cell RNA-sequencing data☆11Updated 2 years ago
- ☆13Updated 6 years ago
- Introduction to single cell RNAseq data analysis and interpretation course work provided by Harvard Informatics Team.☆16Updated 6 years ago