Sturgeon is a CNS neural network classifier
☆51Sep 4, 2026Updated last month
Alternatives and similar repositories for sturgeon
Users that are interested in sturgeon are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆23Aug 13, 2026Updated 2 months ago
- A nextflow pipeline for calling modifications in nanopore reads.☆17Sep 28, 2026Updated 2 weeks ago
- ☆31Jul 28, 2025Updated last year
- Realtime base modification frequency tool☆15Sep 16, 2025Updated last year
- GPU CRF-CTC decoding for nanopore basecalling☆16Oct 7, 2026Updated last week
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- nf-core/demo is a simple nf-core style bioinformatics pipeline for workshops and demos.☆16Oct 7, 2026Updated last week
- A python command line tool to generate modbed files for visualization on WashU Epigenome Browser☆11Aug 7, 2026Updated 2 months ago
- ☆27Nov 14, 2025Updated 11 months ago
- A bioinformatics tool for viewing and calculating base modification frequencies from BAM files☆46Updated this week
- Genome guided re-segmention and visualization for raw nanopore sequencing data.☆47Dec 20, 2018Updated 7 years ago
- Real-time analysis pipeline for nanopore 16S rRNA data☆15Nov 29, 2022Updated 3 years ago
- Minotour API, web and client code☆30Mar 28, 2026Updated 6 months ago
- MethyLYZR: a Naïve Bayesian framework for rapid brain tumor classification from sparse epigenomic data☆19Mar 3, 2025Updated last year
- A pipeline to identify (and remove) certain sequences from raw genomic data. Default taxon to identify (and remove) is Homo sapiens. Remo…☆25Updated this week
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- Metagenomic binning using low-density hashing a support vector machine☆20Oct 2, 2020Updated 6 years ago
- Biochemical-free enrichment or depletion of RNA classes in real-time during direct RNA sequencing☆15Aug 27, 2025Updated last year
- GitHub Action to Sync subtrees with a source project☆11Oct 16, 2019Updated 6 years ago
- Giraffe_View is designed to help assess and visualize the accuracy of long-read sequencing datasets.☆13Sep 3, 2024Updated 2 years ago
- Tools for plotting methylation data in various ways☆199Oct 6, 2026Updated last week
- ClairS: a deep-learning method for long-read tumor–normal pair somatic small variant calling☆115Sep 11, 2026Updated last month
- End-to-end simulation of nanopore sequencing signals with feed-forward transformers☆18Jun 4, 2026Updated 4 months ago
- Pathoscope: Species identification and strain attribution with unassembled sequencing data☆60May 23, 2019Updated 7 years ago
- deSAMBA: fast and accurate classification of metagenomics long reads with sparse approximate matches☆12May 5, 2024Updated 2 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Hybrid Error Correction of Long Reads using Iterative Learning☆10Sep 27, 2018Updated 8 years ago
- ☆12May 6, 2021Updated 5 years ago
- Predict MLST directly from uncorrected long reads☆27Oct 31, 2025Updated 11 months ago
- Nanopore direct RNA basecaller☆11Oct 27, 2022Updated 3 years ago
- NanopolishComp is a Python3 package for downstream analyses of Nanopolish output files☆10Dec 22, 2020Updated 5 years ago
- convert reads from repeated measures of same piece of DNA into spaced matricies for deep learners.☆14Apr 21, 2023Updated 3 years ago
- Test data for MultiQC.☆24Oct 6, 2026Updated last week
- The repository contains code to load a GPT-2 model, perform text generation and create a Twitter Bot☆10Nov 27, 2020Updated 5 years ago
- SV detection tool for nanopore sequence reads☆99Mar 25, 2026Updated 6 months ago
- Bare Metal GPUs on DigitalOcean Gradient AI • AdPurpose-built for serious AI teams training foundational models, running large-scale inference, and pushing the boundaries of what's possible.
- Detecting methylation using signal-level features from Nanopore sequencing reads of plants☆68Aug 12, 2026Updated 2 months ago
- ☆14Sep 26, 2019Updated 7 years ago
- A package to run real time analysis of nanopore methylation data.☆29Updated this week
- ☆22Jun 1, 2026Updated 4 months ago
- End-to-end analysis of Oxford Nanopore single-cell sequencing, from barcode and UMI identification to gene and transcript expression☆120Jan 23, 2026Updated 8 months ago
- Remove lambda phage reads from a fastq file☆29Jan 16, 2023Updated 3 years ago
- Retrieve sequences flanked by an arbitrary number of primers from a nucleotide collection.☆11Jun 11, 2021Updated 5 years ago