institut-de-genomique / BoardIONLinks
☆11Updated 4 years ago
Alternatives and similar repositories for BoardION
Users that are interested in BoardION are comparing it to the libraries listed below
Sorting:
- Nanopore direct RNA basecaller☆11Updated 3 years ago
- Design degenerated primers on highly variable alignments for full genome sequencing or qPCR. Specifically developed for viruses.☆43Updated 2 months ago
- VGEA (Viral Genomes Easily Analyzed) is a pipeline for analysis of RNA virus next-generation sequencing data.☆20Updated 4 years ago
- Minotour API, web and client code☆30Updated 2 years ago
- Realtime base modification frequency tool☆12Updated last month
- ☆30Updated last year
- Super-fast and accurate demultiplexing of direct RNA-seq runs.☆17Updated 3 months ago
- Workflow to prepare high accuracy single molecule consensus sequences from amplicon data using unique molecular identifiers☆34Updated last year
- a tool for simulating nanopore raw signal data☆70Updated last month
- Fast and scalable nanopore adaptive sampling☆34Updated 2 years ago
- Repository for scripts and resources used for metagenomics with Nanopore, PacBio and Illumina sequencing☆21Updated 2 years ago
- A pipeline to run and systematically evaluate Multiple Sequence Alignment (MSA) methods.☆39Updated 3 weeks ago
- The buttery eel - a slow5 guppy/dorado basecaller wrapper☆41Updated 3 months ago
- Influenza genome analysis Nextflow workflow☆30Updated last month
- Multi-platform genome assembly pipeline for Illumina, Nanopore and PacBio reads☆63Updated last year
- Fast and accurate tool for calculating Average Nucleotide Identity (ANI) and clustering virus genomes and metagenomes☆92Updated 5 months ago
- Adapter trimmer for Oxford Nanopore reads using ab initio method☆52Updated 11 months ago
- A toolkit for exploring prokaryotic methylation and base modifications in nanopore sequencing☆50Updated 2 months ago
- A method for measuring allele-specific telomere length and characterizing telomere variant repeat sequences from long reads.☆22Updated this week
- ☆31Updated last year
- Read mapping pipeline for detection and measurement of virus pathogens from metagenomic or clinical data☆42Updated last month
- GUI for inspecting POD5 files☆33Updated 10 months ago
- ARTIC SARS-CoV-2 workflow and reporting☆50Updated 6 months ago
- Protobuf and gRPC specifications for the MinKNOW API☆65Updated last week
- A surveillance-oriented tool to strengthen the linkage between pathogen genetic clusters and epidemiological data☆42Updated 2 weeks ago
- modPhred is a pipeline for detection of DNA/RNA modifications from raw ONT data☆16Updated last year
- A pipeline for high-quality bacterial genome construction using ONT sequencing☆39Updated 3 years ago
- snapper☆13Updated last year
- ☆46Updated 3 weeks ago
- Evaluating Nanopore-based bacterial variant calling☆20Updated 3 months ago