MultiQC / test-dataLinks
Test data for MultiQC.
☆24Updated last week
Alternatives and similar repositories for test-data
Users that are interested in test-data are comparing it to the libraries listed below
Sorting:
- A collection of modules and sub-workflows for Nextflow☆28Updated 2 months ago
- The Zavolab Automated RNA-seq Pipeline☆36Updated 5 months ago
- TIDDIT - structural variant calling☆78Updated 3 weeks ago
- Please consider using/contributing to https://github.com/nf-core/sarek☆41Updated 4 years ago
- Pipeline to evaluate and validate the accuracy of variant calling methods in genomic research☆36Updated 3 weeks ago
- Bioinformatic Analysis pipeLine for SomAtic Mutations In Cancer☆57Updated last week
- Params validation plugin for Nextflow pipelines☆48Updated last year
- Functionality for working with pipeline and sample sheet schema files in Nextflow pipelines☆47Updated 3 weeks ago
- This repository hosts a large collection of Nextflow snippets☆56Updated 11 months ago
- Fully automated generation of UCSC assembly hubs☆35Updated last year
- Master of Pores 2☆23Updated last year
- De novo transcriptome assembler for short reads☆64Updated 7 years ago
- A pipeline for preprocessing NGS data from Illumina, Nanopore and PacBio technologies☆35Updated last year
- conda recipes for genomic data☆84Updated 4 years ago
- Deprecated see https://github.com/MHH-RCUG/nf_wochenende : A whole Genome/Metagenome Sequencing Alignment Pipeline in Python3☆37Updated 3 years ago
- ⛰ covtobed | Convert the coverage track from a BAM file into a BED file☆44Updated last month
- Ultra-efficient taxonomic mapping of NGS data☆51Updated 4 years ago
- MetaSV: An accurate and integrative structural-variant caller for next generation sequencing☆59Updated 8 years ago
- A pipeline to run and systematically evaluate Multiple Sequence Alignment (MSA) methods.☆40Updated last month
- Get, parse, and extract information from the SRA metadata files☆45Updated 3 years ago
- Fast sequencing data quality metrics☆31Updated 3 months ago
- mtDNA Variant Caller☆35Updated last year
- Merging paired-end reads and removing adapters☆30Updated 5 years ago
- Fast FASTQ sample demultiplexing in Rust.☆66Updated 3 weeks ago
- vembrane filters VCF records using python expressions☆67Updated 2 weeks ago
- More realistic simulator for genomic DNA sequences from Illumina machines that achieves a similar k-mer spectrum as the original☆51Updated 3 years ago
- Merging, Annotation, Validation, and Illustration of Structural variants☆75Updated 2 years ago
- RetroSeq is a bioinformatics tool that searches for mobile element insertions from aligned reads in a BAM file and a library of reference…☆67Updated 3 years ago
- Efficiently read and write sequencing data from Python☆69Updated 2 months ago
- Blast2Bam uses the XML results of Blastn, the reference and the fastQ or fasta file(s) to output a SAM file.☆50Updated 4 years ago