An R package for finding non-adenosine residues in poly(A) tails of ONT direct RNA sequencing reads
☆16Sep 26, 2026Updated last month
Alternatives and similar repositories for ninetails
Users that are interested in ninetails are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- R package for visualization and exploratory analysis of Oxford Nanopore direct RNA seq based polyA predictions☆13Jun 25, 2024Updated 2 years ago
- ☆14Oct 25, 2026Updated last week
- A fully convolutional architecture for basecalling nanopore RNA sequencing data☆12Sep 26, 2024Updated 2 years ago
- eVITTA: an easy Visualization and Inference Toolbox for Transcriptome Analysis☆12Mar 23, 2024Updated 2 years ago
- Software for measuring poly(A) tail length and 3′-end modifications using a high-throughput sequencer☆19Aug 18, 2023Updated 3 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Nanopore basecalling and consensus decoding☆46Jul 22, 2022Updated 4 years ago
- "nanoCEM" is a simple tool designed to visualize the features that distinguish between two groups of ONT data at the site level.☆18Oct 13, 2025Updated last year
- A nextflow pipeline for calling modifications in nanopore reads.☆17Updated this week
- DeepEdit: single-molecule detection and phasing of A-to-I RNA editing events using Nanopore direct RNA sequencing☆17Jun 4, 2023Updated 3 years ago
- ☆13Oct 5, 2023Updated 3 years ago
- ☆25May 16, 2020Updated 6 years ago
- snakemake grammar for tree-sitter, based on tree-sitter-python☆12May 12, 2026Updated 5 months ago
- ☆20Jul 13, 2026Updated 3 months ago
- GUI for inspecting POD5 files☆35Dec 19, 2024Updated last year
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- PhyloForge: Unifying micro and macro evolution with comprehensive genomic signals☆10May 17, 2024Updated 2 years ago
- Nanopore raw signal segmentation and RNA modification estimation.☆13Mar 3, 2026Updated 7 months ago
- DInoPORE: Direct detection of INOsines in native RNA with nanoPORE sequencing☆19Apr 11, 2023Updated 3 years ago
- rnalib: a python-based transcriptomics library☆14Jul 27, 2026Updated 3 months ago
- Code accompanying "Direct detection of RNA modifications and structure using single molecule nanopore sequencing"☆14Sep 29, 2021Updated 5 years ago
- Python client library for Guppy☆32Aug 15, 2022Updated 4 years ago
- A universal toolkit for upstream processing of long RNA reads☆245Updated this week
- GPU CRF-CTC decoding for nanopore basecalling☆16Oct 17, 2026Updated 2 weeks ago
- Command line client and Python libraries for CosmosID API☆13Oct 28, 2025Updated last year
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- Xron - an omni basecaller for ONT reads.