☆127Sep 4, 2025Updated 9 months ago
Alternatives and similar repositories for plot1cell
Users that are interested in plot1cell are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- A R package for advanced single cell data viz☆74Aug 29, 2025Updated 10 months ago
- An end-to-end Single-Cell Pipeline designed to facilitate comprehensive analysis and exploration of single-cell data.☆653Mar 11, 2026Updated 3 months ago
- Generate high quality, publication ready visualizations for single cell transcriptomics data.☆225Mar 2, 2026Updated 3 months ago
- R package with collection of functions created and/or curated to aid in the visualization and analysis of single-cell data using R.☆302Updated this week
- scplotter is an R package that is built upon plotthis. It provides a set of functions to visualize single-cell sequencing and spatial dat…☆306Jun 9, 2026Updated 2 weeks ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Useful functions to make your scRNA-seq plot more cool!☆395Apr 18, 2026Updated 2 months ago
- 🐯 tigeR: Tumor Immunotherapy Gene Expression Data Analysis R package☆55Jan 21, 2026Updated 5 months ago
- Coarse-graining of large single-cell RNA-seq data into metacells☆102Apr 16, 2026Updated 2 months ago
- R package to visualize gene expression data based on weighted kernel density estimation☆115Feb 6, 2026Updated 4 months ago
- BioTIP: Biological Tipping-Point Identification and Characterization☆24Oct 20, 2025Updated 8 months ago
- One-step to Cluster and Visualize Gene Expression Matrix☆379Mar 7, 2026Updated 3 months ago
- 🧠 Visualizing Single Cell and Spatial Transcriptomics☆51May 17, 2026Updated last month
- A tool for semi-automatic cell type classification☆490May 22, 2026Updated last month
- Scissor package☆266May 10, 2024Updated 2 years ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- Quantifying metabolism activity at the single-cell resolution☆182Feb 18, 2026Updated 4 months ago
- ☆17Mar 27, 2023Updated 3 years ago
- An implement R package to visualize GSEA results☆228Dec 8, 2025Updated 6 months ago
- ☆224Jun 13, 2026Updated 2 weeks ago
- Aligning gene expression trajectories of single-cell reference and query systems☆89Aug 10, 2025Updated 10 months ago
- Accurate and fast cell marker gene identification with COSG☆66Feb 8, 2026Updated 4 months ago
- Fast Wilcoxon and auROC☆213May 5, 2026Updated last month
- Interpretation of cell states using reference single-cell maps☆323Dec 19, 2025Updated 6 months ago
- Single-cell analysis with non-negative matrix factorization☆49Jul 24, 2025Updated 11 months ago
- End-to-end encrypted cloud storage - Proton Drive • AdSpecial offer: 40% Off Yearly / 80% Off First Month. Protect your most important files, photos, and documents from prying eyes.
- ANS_signature_scoring: A gene expression signature scoring Python package.☆19Jan 18, 2026Updated 5 months ago
- Methods to discover gene programs on single-cell data☆192Jun 5, 2026Updated 3 weeks ago
- NicheNet: predict active ligand-target links between interacting cells☆661Jun 1, 2026Updated 3 weeks ago
- Accurate and fast cell marker gene identification with COSG☆59Mar 7, 2026Updated 3 months ago
- Single-cell Mutual Information-based Network Engineering Ranger☆24Aug 28, 2025Updated 10 months ago
- Significance analysis for clustering single-cell RNA-sequencing data☆127Sep 7, 2024Updated last year
- trajectory inference☆109Jan 27, 2025Updated last year
- AnnData interoperability in R☆188Updated this week
- scDIOR: Single cell data IO softwaRe☆156Feb 15, 2022Updated 4 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Transformer for One-Stop Interpretable Cell-type Annotation☆153Mar 4, 2024Updated 2 years ago
- R package for tissue-specific gene enrichment☆16Mar 10, 2022Updated 4 years ago
- R package for Pathway RespOnsive GENe activity inference☆125Jan 30, 2023Updated 3 years ago
- High dimensional weighted gene co-expression network analysis☆481Jun 16, 2026Updated last week
- Single-Cell ENhancer Target gene mapping using multimodal data with ATAC + RNA☆87Apr 21, 2025Updated last year
- Papers with code for single cell related papers☆314Mar 23, 2026Updated 3 months ago
- Single-cell disease relevance score (scDRS)☆190Sep 2, 2025Updated 9 months ago