TheHumphreysLab / plot1cellLinks
☆116Updated 3 months ago
Alternatives and similar repositories for plot1cell
Users that are interested in plot1cell are comparing it to the libraries listed below
Sorting:
- ☆71Updated 3 years ago
- R package that automatically classifies the cells in the scRNA data by segregating non-malignant cells of tumor microenviroment from the …☆113Updated 3 months ago
- A R package for advanced single cell data viz☆68Updated 3 months ago
- ☆88Updated 3 months ago
- ☆74Updated 2 years ago
- Cellular dynamics across aged human brains uncover a multicellular cascade leading to Alzheimer’s disease☆62Updated 11 months ago
- Single-cell multi-omics analysis reveals regulatory programs in clear cell renal cell carcinoma☆80Updated last year
- STARTRAC(Single T-cell Analysis by Rna-seq and Tcr TRACking)☆110Updated 7 months ago
- Publication Page for Satpathy*, Granja* et al 2019☆95Updated 5 years ago
- wrapper scripts for convenient STARsolo processing of 10X and other scRNA-seq☆74Updated 5 months ago
- ☆78Updated last year
- This repository holds the scripts used to analyze the data presented in "A multi-omic single-cell landscape of human gynecologic malignan…☆49Updated 2 years ago
- The official pipeline for flexible and high-performance analysis of DNBelab C Serie single-cell data.☆124Updated 3 weeks ago
- Tutorial of single-cell RNA-ATAC multiomic sequencing data analysis☆68Updated last year
- SCINA: A Semi-Supervised Subtyping Algorithm of Single Cells and Bulk Samples☆71Updated 3 years ago
- Analysis code used in Galeano Nino et al., Impact of Intratumoral Microbiota on Spatial and Cellular Heterogeneity in human cancer. 2022☆38Updated last year
- Pipeline for exploring metebolic heterogeneity at single-cell resolution☆74Updated 5 years ago
- Accompanying code for the tutorial: Annotating single cell transcriptomic maps using automated and manual methods☆97Updated 2 years ago
- ☆112Updated last year
- SCSA: cell type annotation for single-cell RNA-seq data☆92Updated 2 years ago
- ☆63Updated 6 years ago
- Create stacked violin plot☆51Updated 3 years ago
- Analysis of cell-cell communication at single-cell resolution☆105Updated last year
- SNV calling from single cell sequencing☆116Updated last year
- R Package for Single-Cell Dataset Processing and Visualization☆65Updated 4 years ago
- The integration of single cell rank-based gene set enrichment analysis☆140Updated 5 months ago
- marker-based purification of cell types from single-cell RNA-seq datasets☆131Updated 4 months ago
- A tool for semi-automatic cell type harmonization and integration☆115Updated last month
- Efficient and precise single-cell reference atlas mapping with Symphony☆112Updated last month
- Direct estimation of mean and covariance from single cell RNA seq experiments☆123Updated 7 months ago