Alternatives and similar repositories for plot1cell:

Users that are interested in plot1cell are comparing it to the libraries listed below

• xmc811 / Scillus
  R Package for Single-Cell Dataset Processing and Visualization
  ☆61Updated 3 years ago
• TheHumphreysLab / plot1cell
  ☆104Updated 2 weeks ago
• arc85 / celltalker
  Inference of cell-cell communication from single-cell RNAseq data
  ☆48Updated last year
• Coolgenome / iTALK
  ☆59Updated 5 years ago
• junjunlab / ggSCvis
  Visualizing SingleCell data Using GGplot2
  ☆31Updated 5 months ago
• Zaoqu-Liu / BioEnricher
  Integrate Analysis and Visualization for Bioinformatic Enrichment Analyzer
  ☆73Updated last year
• ycl6 / StackedVlnPlot
  Create stacked violin plot
  ☆46Updated 3 years ago
• FredHutch / Galeano-Nino-Bullman-Intratumoral-Microbiota_2022
  Analysis code used in Galeano Nino et al., Impact of Intratumoral Microbiota on Spatial and Cellular Heterogeneity in human cancer. 2022
  ☆37Updated last year
• YutingPKU / SingleCell-Multiomics
  ☆64Updated 2 years ago
• Japrin / STARTRAC
  STARTRAC(Single T-cell Analysis by Rna-seq and Tcr TRACking)
  ☆96Updated last year
• aliceygao / pan-Fibroblast
  ☆39Updated 7 months ago
• youqiongye / CRC_scRNAseq
  ☆45Updated 3 years ago
• haniffalab / scRNA-seq_analysis
  Single cell RNA-seq analysis bundle
  ☆34Updated 5 years ago
• jlaffy / infercna
  Infer Copy Number Alterations and Clonality in (Single-Cell) RNA-Seq Data
  ☆33Updated last year
• ShellyCoder / cellcall
  inferring cell-cell communication from scRNA-seq of ligand-receptor
  ☆78Updated last year
• Teichlab / Genes2Genes
  Aligning gene expression trajectories of single-cell reference and query systems
  ☆62Updated 5 months ago
• SGI-LungCancer / SingleCell
  Code repository for single cell RNA-seq
  ☆34Updated 4 years ago
• genecell / COSGR
  Accurate and fast cell marker gene identification with COSG
  ☆59Updated 2 years ago
• campbio / decontX
  Methods for decontamination of single cell data
  ☆39Updated last month
• jcao89757 / SCINA
  SCINA: A Semi-Supervised Subtyping Algorithm of Single Cells and Bulk Samples
  ☆67Updated 3 years ago
• aerickso / SpatialInferCNV
  Clone Calling from Visium Spatial Transcriptomics of Cancer samples
  ☆62Updated 2 years ago
• guokai8 / scGSVA
  scGSVA: Perform GSVA for single cell RNA seq
  ☆55Updated 4 months ago
• chloelulu / scMayoMap
  ☆21Updated last year
• RegnerM2015 / scENDO_scOVAR_2020
  This repository holds the scripts used to analyze the data presented in "A multi-omic single-cell landscape of human gynecologic malignan…
  ☆39Updated last year
• liziyie / scDVA
  An R shiny based tool used for single cell RNA-seq data visualization and analysis.
  ☆33Updated 4 years ago
• BostonGene / MFP
  Mollecular Functional Portraits
  ☆38Updated 11 months ago
• Aleksobrad / single-cell-rcc-pipeline
  Data files and code for analysis of single-cell ccRCC data for the manuscript "Tumor-Specific Cell Populations in Clear Cell Renal Carcin…
  ☆45Updated 3 years ago
• SiyuanHuang1 / cpplot
  Visualize the results of cell-cell communication analysis
  ☆20Updated 2 years ago
• Japrin / sscClust
  simpler single cell RNAseq data clustering
  ☆40Updated 3 weeks ago
• cssmillie / ulcerative_colitis
  ☆60Updated 4 years ago