HaojiaWu / plot1cell
A R package for advanced single cell data viz
☆65Updated last year
Alternatives and similar repositories for plot1cell:
Users that are interested in plot1cell are comparing it to the libraries listed below
- R Package for Single-Cell Dataset Processing and Visualization☆61Updated 3 years ago
- ☆104Updated this week
- Inference of cell-cell communication from single-cell RNAseq data☆48Updated last year
- Create stacked violin plot☆46Updated 3 years ago
- STARTRAC(Single T-cell Analysis by Rna-seq and Tcr TRACking)☆96Updated last year
- ☆37Updated 7 months ago
- ☆59Updated 5 years ago
- ☆64Updated 2 years ago
- Visualizing SingleCell data Using GGplot2☆31Updated 5 months ago
- scGSVA: Perform GSVA for single cell RNA seq☆55Updated 4 months ago
- Code repository for single cell RNA-seq☆34Updated 4 years ago
- Single cell RNA-seq analysis bundle☆34Updated 5 years ago
- inferring cell-cell communication from scRNA-seq of ligand-receptor☆77Updated last year
- An R shiny based tool used for single cell RNA-seq data visualization and analysis.☆33Updated 4 years ago
- Integrate Analysis and Visualization for Bioinformatic Enrichment Analyzer☆73Updated last year
- Methods for decontamination of single cell data☆38Updated 3 weeks ago
- Coarse-graining of large single-cell RNA-seq data into metacells☆73Updated 6 months ago
- Aligning gene expression trajectories of single-cell reference and query systems☆60Updated 4 months ago
- ☆60Updated 4 years ago
- ☆61Updated 8 months ago
- ☆21Updated last year
- Data files and code for analysis of single-cell ccRCC data for the manuscript "Tumor-Specific Cell Populations in Clear Cell Renal Carcin…☆45Updated 3 years ago
- ☆45Updated 3 years ago
- Single-cell multi-omics analysis reveals regulatory programs in clear cell renal cell carcinoma☆77Updated 4 months ago
- R package for pathway analysis in scRNA-seq data☆70Updated 6 months ago
- A tool for removing doublets from single-cell RNA-seq data☆72Updated 4 years ago
- Analysis code used in Galeano Nino et al., Impact of Intratumoral Microbiota on Spatial and Cellular Heterogeneity in human cancer. 2022☆37Updated last year
- Visualize the results of cell-cell communication analysis☆20Updated 2 years ago
- Public code repository for the Banovich Lab at the Translational Genomics Research Institute (TGen).☆43Updated last year
- Robust identification of perturbed cell types in single-cell RNA-seq data☆31Updated 3 months ago