HaojiaWu / plot1cellLinks
A R package for advanced single cell data viz
☆67Updated last year
Alternatives and similar repositories for plot1cell
Users that are interested in plot1cell are comparing it to the libraries listed below
Sorting:
- R Package for Single-Cell Dataset Processing and Visualization☆63Updated 3 years ago
- Inference of cell-cell communication from single-cell RNAseq data☆48Updated 2 months ago
- Integrate Analysis and Visualization for Bioinformatic Enrichment Analyzer☆78Updated last year
- Infer Copy Number Alterations and Clonality in (Single-Cell) RNA-Seq Data☆41Updated last year
- scGSVA: Perform GSVA for single cell RNA seq☆62Updated 8 months ago
- Methods for decontamination of single cell data☆47Updated 4 months ago
- ☆62Updated 5 years ago
- Code repository for single cell RNA-seq☆35Updated 4 years ago
- Accurate and fast cell marker gene identification with COSG☆61Updated 2 years ago
- An R shiny based tool used for single cell RNA-seq data visualization and analysis.☆33Updated 4 years ago
- ☆68Updated 2 years ago
- Enrichment Networks for Pathway Enrichment Analysis☆55Updated 2 years ago
- Create stacked violin plot☆49Updated 3 years ago
- ☆112Updated 4 months ago
- Aligning gene expression trajectories of single-cell reference and query systems☆68Updated 8 months ago
- ☆68Updated last year
- Repository for codes for the HBCA paper☆36Updated 2 years ago
- A tool for removing doublets from single-cell RNA-seq data☆74Updated 4 years ago
- ☆44Updated 11 months ago
- Gene set enrichment analysis for single-cell RNAseq data☆28Updated 2 years ago
- Robust identification of perturbed cell types in single-cell RNA-seq data☆31Updated 7 months ago
- STARTRAC(Single T-cell Analysis by Rna-seq and Tcr TRACking)☆107Updated 2 months ago
- Analysis code used in Galeano Nino et al., Impact of Intratumoral Microbiota on Spatial and Cellular Heterogeneity in human cancer. 2022☆37Updated last year
- Gene signature extraction and cell-identity recognition at individual cell level from single-cell RNA-seq.☆95Updated last year
- Single-cell multi-omics analysis reveals regulatory programs in clear cell renal cell carcinoma☆79Updated 8 months ago
- Single cell RNA-seq analysis bundle☆35Updated 5 years ago
- ☆63Updated 4 years ago
- Visualize the results of cell-cell communication analysis☆22Updated 2 years ago
- Inferring CNV data from single cell ATAC seq☆23Updated 2 weeks ago
- Code for reproducing the analysis in Gavish et al. "The transcriptional hallmarks of intra-tumor heterogeneity across a thousand tumors".☆117Updated 10 months ago