Alternatives and similar repositories for GseaVis:

Users that are interested in GseaVis are comparing it to the libraries listed below

• czbiohub-sf / scell_lung_adenocarcinoma
  This is the repository that contains the analysis of the lung adenocarcinoma single cell dataset
  ☆146Updated 4 years ago
• IOBR / IOBR
  IOBR is an R package to perform comprehensive analysis of tumor microenvironment and signatures for immuno-oncology.
  ☆234Updated 2 weeks ago
• junjunlab / junjunlab
  ☆20Updated last month
• xjsun1221 / tinyarray
  plots function for array
  ☆91Updated 9 months ago
• junjunlab / scRNAtoolVis
  Useful functions to make your scRNA-seq plot more cool!
  ☆329Updated 2 months ago
• SingleR-inc / SingleR
  Clone of the Bioconductor repository for the SingleR package.
  ☆185Updated last month
• chuiqin / irGSEA
  The integration of single cell rank-based gene set enrichment analysis
  ☆121Updated 8 months ago
• navinlabcode / copykat
  ☆228Updated 9 months ago
• sunduanchen / Scissor
  Scissor package
  ☆214Updated 10 months ago
• neurorestore / Libra
  ☆163Updated 7 months ago
• wu-yc / scMetabolism
  Quantifying metabolism activity at the single-cell resolution
  ☆132Updated 7 months ago
• samuel-marsh / scCustomize
  R package with collection of functions created and/or curated to aid in the visualization and analysis of single-cell data using R.
  ☆247Updated last week
• BioSenior / ggVolcano
  The goal of `ggVolcano` is to help users make a beautiful volcano map more easily, including general volcano plot(`ggvolcano`), gradient …
  ☆81Updated 2 years ago
• junjunlab / ClusterGVis
  One-step to Cluster and Visualize Gene Expression Matrix
  ☆283Updated 3 weeks ago
• tjhwangxiong / TCGAplot
  A number of functions were generated to perform pan-cancer DEG analysis, correlation analysis between gene expression and TMB, MSI, TIME,…
  ☆99Updated this week
• JarningGau / ProjectSVR
  A package for reference mapping and nice visualization
  ☆19Updated 11 months ago
• jmzeng1314 / AnnoProbe
  ☆105Updated 2 years ago
• jmzeng1314 / scRNA_10X
  ☆94Updated 5 years ago
• Sijin-ZhangLab / PanMyeloid
  ☆101Updated 4 years ago
• saeyslab / multinichenetr
  MultiNicheNet: a flexible framework for differential cell-cell communication analysis from multi-sample multi-condition single-cell trans…
  ☆142Updated 2 months ago
• basilkhuder / Seurat-to-RNA-Velocity
  A guide to using a Seurat object in conjunction with RNA Velocity
  ☆138Updated 3 years ago
• JiekaiLab / scDIOR
  scDIOR: Single cell data IO softwaRe
  ☆140Updated 3 years ago
• ixxmu / mp_duty
  抓取网络文章到github issues保存
  ☆145Updated this week
• constantAmateur / SoupX
  R package to quantify and remove cell free mRNAs from droplet based scRNA-seq data
  ☆266Updated 2 years ago
• junjunlab / transPlotR
  An elegant package to visualize gene structures
  ☆73Updated last year
• WeiSong-bio / jmzeng1314-5years-summarize
  ☆117Updated 5 years ago
• huayc09 / SeuratExtend
  ☆130Updated last week
• digitalcytometry / cytotrace2
  CytoTRACE 2 is an interpretable AI method for predicting cellular potency and absolute developmental potential from scRNA-seq data.
  ☆131Updated this week
• ZJUFanLab / scCATCH
  Automatic Annotation on Cell Types of Clusters from Single-Cell RNA Sequencing Data
  ☆226Updated last year
• pwwang / scplotter
  scplotter is an R package that is built upon plotthis. It provides a set of functions to visualize single-cell sequencing data in an easy…
  ☆143Updated 2 weeks ago