Alternatives and similar repositories for GseaVis

Users that are interested in GseaVis are comparing it to the libraries listed below

• IOBR / IOBR
  IOBR is an R package to perform comprehensive analysis of tumor microenvironment and signatures for immuno-oncology.
  ☆253Updated 3 months ago
• czbiohub-sf / scell_lung_adenocarcinoma
  This is the repository that contains the analysis of the lung adenocarcinoma single cell dataset
  ☆150Updated 4 years ago
• junjunlab / ClusterGVis
  One-step to Cluster and Visualize Gene Expression Matrix
  ☆318Updated this week
• xjsun1221 / tinyarray
  plots function for array
  ☆94Updated last year
• huayc09 / SeuratExtend
  ☆163Updated last week
• tjhwangxiong / TCGAplot
  A number of functions were generated to perform pan-cancer DEG analysis, correlation analysis between gene expression and TMB, MSI, TIME,…
  ☆113Updated 4 months ago
• jmzeng1314 / scRNA_10X
  ☆94Updated 6 years ago
• SGDDNB / ShinyCell
  Shiny Interactive Web Apps for Single-Cell Data
  ☆193Updated 4 months ago
• neurorestore / Libra
  ☆174Updated 3 months ago
• navinlabcode / copykat
  ☆247Updated last year
• ixxmu / mp_duty
  抓取网络文章到github issues保存
  ☆164Updated last week
• SingleR-inc / SingleR
  Clone of the Bioconductor repository for the SingleR package.
  ☆193Updated last month
• samuel-marsh / scCustomize
  R package with collection of functions created and/or curated to aid in the visualization and analysis of single-cell data using R.
  ☆269Updated this week
• pwwang / scplotter
  scplotter is an R package that is built upon plotthis. It provides a set of functions to visualize single-cell sequencing data in an easy…
  ☆176Updated 2 weeks ago
• junjunlab / junjunlab
  ☆21Updated last month
• BioSenior / ggVolcano
  The goal of `ggVolcano` is to help users make a beautiful volcano map more easily, including general volcano plot(`ggvolcano`), gradient …
  ☆90Updated 2 years ago
• junjunlab / scRNAtoolVis
  Useful functions to make your scRNA-seq plot more cool!
  ☆356Updated 3 months ago
• jmzeng1314 / AnnoProbe
  ☆110Updated 2 years ago
• zktuong / ktplots
  Some tools for plotting single-cell data
  ☆174Updated 3 months ago
• basilkhuder / Seurat-to-RNA-Velocity
  A guide to using a Seurat object in conjunction with RNA Velocity
  ☆139Updated 3 years ago
• constantAmateur / SoupX
  R package to quantify and remove cell free mRNAs from droplet based scRNA-seq data
  ☆291Updated 2 years ago
• chuiqin / irGSEA
  The integration of single cell rank-based gene set enrichment analysis
  ☆130Updated last month
• ZJUFanLab / scCATCH
  Automatic Annotation on Cell Types of Clusters from Single-Cell RNA Sequencing Data
  ☆231Updated 2 years ago
• enblacar / SCpubr
  Generate high quality, publication ready visualizations for single cell transcriptomics data.
  ☆205Updated 2 weeks ago
• wu-yc / scMetabolism
  Quantifying metabolism activity at the single-cell resolution
  ☆137Updated 2 months ago
• cellgeni / schard
  reticulate-free single cell format conversion
  ☆182Updated 3 weeks ago
• ayueme / easyTCGA
  Make TCGA download and prepare easy!
  ☆136Updated last year
• jmzeng1314 / methy_array
  ☆101Updated 5 years ago
• sunduanchen / Scissor
  Scissor package
  ☆231Updated last year
• jmzeng1314 / IRseq
  ☆10Updated 8 years ago