Useful functions to make your scRNA-seq plot more cool!
☆393Apr 18, 2026Updated last month
Alternatives and similar repositories for scRNAtoolVis
Users that are interested in scRNAtoolVis are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- An annotation package for ggplot plot☆119Nov 17, 2025Updated 6 months ago
- An implement R package to visualize GSEA results☆223Dec 8, 2025Updated 6 months ago
- An end-to-end Single-Cell Pipeline designed to facilitate comprehensive analysis and exploration of single-cell data.☆647Mar 11, 2026Updated 2 months ago
- An R package to visualize bigwigs.☆31Jul 5, 2022Updated 3 years ago
- One-step to Cluster and Visualize Gene Expression Matrix☆376Mar 7, 2026Updated 3 months ago
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- An elegant package to visualize gene structures☆82Apr 8, 2023Updated 3 years ago
- Visualizing SingleCell data Using GGplot2☆37Sep 28, 2024Updated last year
- A R package for advanced single cell data viz☆74Aug 29, 2025Updated 9 months ago
- IOBR is an R package to perform comprehensive analysis of tumor microenvironment and signatures for immuno-oncology. https://iobr.github.…☆290May 31, 2026Updated last week
- Extract gene length based on featureCount calculation gene nonredundant exon length method.☆19Feb 14, 2022Updated 4 years ago
- Quantifying metabolism activity at the single-cell resolution☆180Feb 18, 2026Updated 3 months ago
- Scissor package☆266May 10, 2024Updated 2 years ago
- 🐯 tigeR: Tumor Immunotherapy Gene Expression Data Analysis R package☆55Jan 21, 2026Updated 4 months ago
- A python library for multi omics included bulk, single cell and spatial RNA-seq analysis.☆1,012Updated this week
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- The integration of single cell rank-based gene set enrichment analysis☆157Jan 14, 2026Updated 4 months ago
- scplotter is an R package that is built upon plotthis. It provides a set of functions to visualize single-cell sequencing and spatial dat…☆303May 26, 2026Updated last week
- Generate high quality, publication ready visualizations for single cell transcriptomics data.☆223Mar 2, 2026Updated 3 months ago
- Papers with code for single cell related papers☆311Mar 23, 2026Updated 2 months ago
- ☆126Sep 4, 2025Updated 9 months ago
- ☆113Sep 16, 2020Updated 5 years ago
- CytoTRACE 2 is an interpretable AI method for predicting cellular potency and absolute developmental potential from scRNA-seq data.☆254May 14, 2026Updated 3 weeks ago
- A number of functions were generated to perform pan-cancer DEG analysis, correlation analysis between gene expression and TMB, MSI, TIME,…☆124Mar 28, 2025Updated last year
- R package with collection of functions created and/or curated to aid in the visualization and analysis of single-cell data using R.☆301May 11, 2026Updated 3 weeks ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- extract gene TSS site form gencode/ensembl/gencode database GTF file and export bed format file.☆12Jan 24, 2022Updated 4 years ago
- High dimensional weighted gene co-expression network analysis☆476Mar 13, 2026Updated 2 months ago
- Integrate Analysis and Visualization for Bioinformatic Enrichment Analyzer☆83Dec 16, 2023Updated 2 years ago
- Inferring CNV from Single-Cell RNA-Seq☆671Nov 14, 2025Updated 6 months ago
- A package to help convert different single-cell data formats to each other☆468Feb 20, 2026Updated 3 months ago
- scGSVA: Perform GSVA for single cell RNA seq☆82Mar 1, 2026Updated 3 months ago
- ☆58Feb 23, 2024Updated 2 years ago
- Construct Tumor Transition Zone Microenvironment☆58Jun 25, 2025Updated 11 months ago
- Functions for identifying and characterizing continuous developmental trajectories in single-cell data.☆338Apr 23, 2024Updated 2 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- R package for detecting doublets in single-cell RNA sequencing data☆548Mar 21, 2025Updated last year
- R toolkit for inference, visualization and analysis of cell-cell communication from single-cell and spatially resolved transcriptomics☆623Mar 4, 2026Updated 3 months ago
- Extract Sequence from Genome According to Annotation File☆40Apr 16, 2025Updated last year
- plotthis is an R package that is built upon ggplot2 and other plotting packages.☆88Apr 29, 2026Updated last month
- A computational method to rank and infer drug-responsive cell population towards in-silico drug perturbation using a target-perturbed gen…☆74Oct 16, 2025Updated 7 months ago
- Integrating Ribo-SEQ Upstream and Downstream Analysis☆12Oct 14, 2024Updated last year
- ☆13Mar 13, 2026Updated 2 months ago