Alternatives and similar repositories for GBmap:

Users that are interested in GBmap are comparing it to the libraries listed below

• aet21 / SCENT
  Estimation of Single-Cell Potency with Single Cell Entropy
  ☆40Updated last year
• Yelab2020 / Cottrazm
  Construct Tumor Transition Zone Microenvironment
  ☆41Updated 4 months ago
• ChanLab-UTSW / BreastCancer_Integrated
  ☆28Updated last month
• Coolgenome / TCM
  Codes used in pan-T cell analysis
  ☆54Updated 2 years ago
• jlaffy / scalop
  Single Cell Analysis Operations
  ☆13Updated last week
• msraredon / NICHES
  Niche Interactions and Cellular Heterogeneity in Extracellular Signaling
  ☆52Updated 6 months ago
• Teichlab / Genes2Genes
  Aligning gene expression trajectories of single-cell reference and query systems
  ☆62Updated 5 months ago
• aerickso / SpatialInferCNV
  Clone Calling from Visium Spatial Transcriptomics of Cancer samples
  ☆62Updated 2 years ago
• genecell / COSG
  Accurate and fast cell marker gene identification with COSG
  ☆43Updated 2 weeks ago
• FloWuenne / scFunctions
  Functions for single cell data analysis
  ☆31Updated 3 years ago
• youqiongye / CRC_scRNAseq
  ☆45Updated 3 years ago
• Chuxj / CRC-atlas
  ☆25Updated 9 months ago
• yqq-chen / CRC_ICB
  ☆29Updated last year
• tiroshlab / Spatial_Glioma
  Code for major analyses in "Integrative spatial analysis reveals a multi-layered organization of glioblastoma" paper
  ☆41Updated 2 months ago
• Lan-lab / sc-GC
  ☆30Updated 2 years ago
• aliceygao / pan-Fibroblast
  ☆39Updated 7 months ago
• meta-cancer / scPLC
  Codes for the scPLC project
  ☆63Updated 2 years ago
• Aleksobrad / single-cell-rcc-pipeline
  Data files and code for analysis of single-cell ccRCC data for the manuscript "Tumor-Specific Cell Populations in Clear Cell Renal Carcin…
  ☆45Updated 3 years ago
• jackbibby1 / SCPA
  R package for pathway analysis in scRNA-seq data
  ☆72Updated 7 months ago
• yanailab / PanCancer
  Data available at: https://www.dropbox.com/sh/jh4s57kgbb0rnxe/AABoMK466cGc1OKsOuFN10wca?dl=0 and https://nyulangone-my.sharepoint.com//g/…
  ☆30Updated 2 years ago
• jumphone / Vector
  Unsupervised Inference of Developmental Directions for Single Cells
  ☆21Updated last year
• liziyie / Onco-fetal-CAF-in-HCC
  ☆19Updated last year
• KramannLab / visium_heart
  Spatial transcriptomics of heart tissue
  ☆20Updated 2 years ago
• matanhofree / crc-immune-hubs
  Principal analysis code used in for analysis of single cell RNAseq of primary untreated colon cancer. As described in: "Spatially organiz…
  ☆39Updated 3 years ago
• LungCellAtlas / scRNAseq_pipelines
  Repository for the building, sharing and editing of scRNAseq pipelines for the Lung Cell Atlas
  ☆34Updated 4 years ago
• chloelulu / scMayoMap
  ☆21Updated last year
• campbio / decontX
  Methods for decontamination of single cell data
  ☆39Updated last month
• Single-Cell-Genomics-Group-CNAG-CRG / TonsilAtlas
  Scripts and notebooks to reproduce all analysis from Massoni-Badosa et al. (2022)
  ☆28Updated 2 months ago
• Coolgenome / iTALK
  ☆59Updated 5 years ago
• bio-Pixel / panVC
  ☆42Updated last year