TencentAILabHealthcare / scTranslatorLinks
☆36Updated this week
Alternatives and similar repositories for scTranslator
Users that are interested in scTranslator are comparing it to the libraries listed below
Sorting:
- ☆30Updated 2 years ago
- ☆42Updated last year
- Gene group activity utility functions for Scanpy☆76Updated 5 months ago
- End-to-end analysis of spatial multi-omics data☆75Updated 2 months ago
- Online single-cell data integration through projecting heterogeneous datasets into a common cell-embedding space☆77Updated 3 weeks ago
- scDesign3 generates realistic in silico data for multimodal single-cell and spatial omics☆95Updated 2 months ago
- Predict RNA velocity through deep learning☆69Updated last year
- Additional code and analysis from the single-cell integration benchmarking project☆65Updated 2 years ago
- Context specific and dynamic gene regulatory network reconstruction and analysis☆117Updated 9 months ago
- ☆106Updated 3 weeks ago
- Python package for analysis of multiomic single cell RNA-seq and ATAC-seq.☆61Updated last year
- ☆58Updated 8 months ago
- ☆44Updated 2 months ago
- Deep learning model for single-cell inference of multi-omic profiles from a single input modality.☆42Updated last year
- ☆51Updated 6 months ago
- scMEGA: Single-cell Multiomic Enhancer-based Gene regulAtory network inference☆39Updated 8 months ago
- SIMBA: SIngle-cell eMBedding Along with features☆61Updated 7 months ago
- DIALOGUE is a dimensionality reduction method that uses cross-cell-type associations to identify multicellular programs (MCPs) and map th…☆110Updated last year
- A generative topic model that facilitates integrative analysis of large-scale single-cell RNA sequencing data.☆50Updated 3 years ago
- ☆42Updated last week
- CellWhisperer bridges the gap between transcriptomics data and natural language, enabling intuitive interaction with scRNA-seq datasets☆55Updated 7 months ago
- R implementation of GeneTrajectory☆58Updated last year
- ☆47Updated last year
- Snakemake pipeline that works with the scIB package to benchmark data integration methods.☆73Updated 4 months ago
- spatial transcriptome, single cell☆68Updated 2 years ago
- Single cell omics biology annotations☆51Updated last month
- Accelerated, Python-only, single-cell integration benchmarking metrics☆59Updated this week
- Utilizing single-cell omics from patients tumor to predict response and resistance.☆67Updated 2 years ago
- PENCIL is a novel tool for singlecell data analysis to identify phenotype associated subpopulations and informative genes simultaneously.☆28Updated last year
- A simulator for single cell multi-omics and spatial omics data that provides ground truth to benchmark a wide range of methods.☆47Updated 4 months ago