☆97Aug 24, 2025Updated 11 months ago
Alternatives and similar repositories for scTranslator
Users that are interested in scTranslator are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆55Dec 5, 2024Updated last year
- ☆359Dec 13, 2023Updated 2 years ago
- Supervised cell type identification for scATAC-seq data☆15Aug 23, 2023Updated 2 years ago
- ☆40Jun 24, 2025Updated last year
- ☆14Feb 19, 2024Updated 2 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- ☆18Jan 23, 2026Updated 6 months ago
- ☆19May 25, 2026Updated 2 months ago
- Single-cell perturbation analysis☆338Updated this week
- MR-link-2: pleiotropy robust cis MR☆23Jun 30, 2026Updated 3 weeks ago
- Quantification of isoform usage and alternative polyadenylation (APA) from single-cell RNA-seq using a Nextflow-based pipeline.☆36Nov 6, 2025Updated 8 months ago
- ☆178Jan 30, 2026Updated 5 months ago
- Multi-omic single-cell optimal transport tools☆215Updated this week
- A High Effect Marker Gene Search Tool for Single-cell RNA-seq Analysis☆35Sep 14, 2024Updated last year
- ☆17Jul 13, 2024Updated 2 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- ☆17Jun 22, 2024Updated 2 years ago
- R and MATLAB scripts for MAGICAL☆12Jun 26, 2024Updated 2 years ago
- 🏃 The go-to single-cell Foundation Model☆155May 20, 2026Updated 2 months ago
- Cell clustering and communication network inference for single-cell transcriptomics☆15Sep 18, 2024Updated last year
- CHOIR : Clustering Hierarchy Optimization by Iterative Random forests (www.CHOIRclustering.com)☆93Apr 15, 2026Updated 3 months ago
- ☆21Feb 28, 2025Updated last year
- GEARS is a geometric deep learning model that predicts outcomes of novel multi-gene perturbations☆386Feb 1, 2025Updated last year
- monae: multi-modal single-cell integration and imputation☆13Sep 13, 2024Updated last year
- "Topological Identification and Interpretation for Single-cell Gene Regulation Elucidation across Multiple Platforms using scMGCA" in Nat…☆19Feb 5, 2023Updated 3 years ago
- Deploy open-source AI quickly and easily - Special Bonus Offer • AdRunpod Hub is built for open source. One-click deployment and autoscaling endpoints without provisioning your own infrastructure.
- ☆24Sep 25, 2025Updated 10 months ago
- Analysis of cell-cell communication at single-cell resolution☆107Sep 10, 2024Updated last year
- Efficiently compute robust markers across single-cell datasets☆13Apr 21, 2021Updated 5 years ago
- A Predictive World Model of the Transcriptome☆35Oct 18, 2025Updated 9 months ago
- ☆30Sep 9, 2025Updated 10 months ago
- ESICCC: A systematic computational framework for evaluation, selection and integration of cell-cell communication inference methods☆13Jan 10, 2024Updated 2 years ago
- BulkFormer: A large-scale foundation model for human bulk transcriptomes☆71Jul 3, 2026Updated 3 weeks ago
- Identification and targeting of treatment resistant progenitor populations in T-cell Acute Lymphoblastic Leukemia☆15May 16, 2024Updated 2 years ago
- Tool for IDentification and Enumeration of Spliced and Unspliced Read Fragments☆18Jun 23, 2026Updated last month
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- Trajectory inference across multiple conditions with condiments: differential topology, progression, differentiation, and expression☆32Dec 3, 2024Updated last year
- SIMBA: SIngle-cell eMBedding Along with features☆20Jan 6, 2026Updated 6 months ago
- Survival Support Vector Analysis☆20Apr 4, 2025Updated last year
- SIDISH: Semi-supervised Iterative Deep Learning for Identifying Single-cell High-risk Populations☆23Jan 23, 2026Updated 6 months ago
- [Nature Biomedical Engineering]This is the official code repo for the paper: spEMO: Exploring the Capacity of Foundation Models for Analy…☆22May 9, 2026Updated 2 months ago
- ☆17Sep 28, 2022Updated 3 years ago
- TF Binding and Expression Target Analysis 2☆21Nov 19, 2025Updated 8 months ago