TencentAILabHealthcare / scPROTEINLinks
☆52Updated 7 months ago
Alternatives and similar repositories for scPROTEIN
Users that are interested in scPROTEIN are comparing it to the libraries listed below
Sorting:
- Deep Transfer Learning of Drug Sensitivity by Integrating Bulk and Single-cell RNA-seq data☆54Updated 11 months ago
- Transformer for One-Stop Interpretable Cell-type Annotation☆142Updated last year
- Single-cell biological network inference using a heterogeneous graph transformer☆73Updated 4 months ago
- Repository for paper scMulan: a multitask generative pre-trained language model for single-cell analysis.☆58Updated last year
- PerturbNet is a deep generative model that can predict the distribution of cell states induced by chemical or genetic perturbation☆34Updated this week
- Codes for paper: Evaluating the Utilities of Large Language Models in Single-cell Data Analysis.☆71Updated last month
- A unified approach for integrating spatial and single-cell transcriptomics data by leveraging deep generative models☆67Updated last year
- ☆72Updated 10 months ago
- ☆49Updated 4 months ago
- ☆36Updated last month
- Code for evaluating single cell foundation models scBERT and scGPT☆44Updated 10 months ago
- Cell-type Annotation for Single-cell Transcriptomics using Deep Learning with a Weighted Graph Neural Network☆103Updated 2 years ago
- Repository for Nicheformer: a foundation model for single-cell and spatial omics☆94Updated 3 months ago
- ☆82Updated 2 years ago
- ☆38Updated 2 years ago
- GeneCompass☆84Updated 3 weeks ago
- A model developed for the generation of scRNA-seq data☆67Updated 4 months ago
- A Deep Learning-Based Model for the integration, cross-dataset cross-modality generation, self augmentation and matched multi-omics simul…☆15Updated 4 months ago
- Deep Learning the T Cell Receptor Binding Specificity of Neoantigen☆82Updated 3 years ago
- The Compositional Perturbation Autoencoder (CPA) is a deep generative framework to learn effects of perturbations at the single-cell leve…☆102Updated 11 months ago
- Official repo for CellPLM: Pre-training of Cell Language Model Beyond Single Cells.☆88Updated last year
- scPerturb: A resource and a python/R tool for single-cell perturbation data☆129Updated 4 months ago
- ☆59Updated last week
- A generative topic model that facilitates integrative analysis of large-scale single-cell RNA sequencing data.☆50Updated 3 years ago
- ☆18Updated 2 years ago
- SIMBA: SIngle-cell eMBedding Along with features☆63Updated 9 months ago
- Deep learning-based tissue compositions and cell-type-specific gene expression analysis with tissue-adaptive autoencoder (TAPE)☆57Updated last year
- A VGAE-based model to infer transcription factor regulatory network☆27Updated 2 years ago
- ☆10Updated last month
- ☆19Updated 9 months ago