zhuhr213 / HDRNet
☆11Updated last year
Alternatives and similar repositories for HDRNet:
Users that are interested in HDRNet are comparing it to the libraries listed below
- ☆18Updated last month
- Computational Optimization of DNA Activity (CODA)☆56Updated 2 months ago
- ☆18Updated last year
- a machine learning model to identify nucleotide features determining RNA subcellular localization☆13Updated 2 years ago
- ☆27Updated 2 months ago
- Deep Learning the T Cell Receptor Binding Specificity of Neoantigen☆78Updated 2 years ago
- Modelling RBP binding preferences to predict RPB binding sites☆11Updated last year
- NeuronMotif: deciphering cis-regulatory codes by layerwise demixing of deep neural networks☆15Updated last year
- ☆17Updated 5 months ago
- A supervised learning model based on Graph Neural Network to predict gene co-expression from chromatin contacts☆11Updated 2 years ago
- SpliceTransformer(SpTransformer) is a deep learning tool to predict tissue specific splicing site from pre-mRNA sequence☆20Updated 4 months ago
- C.Origami, a prediction and screening framework for cell type-specific 3D chromatin structure.☆73Updated 8 months ago
- code to run EPInformer for gene expression prediction and gene-enhancer links prioritization☆38Updated 4 months ago
- Scripts and datasets to reproduce the experiment of the paper "Exploring non-coding RNA functions with deep learning tools"☆13Updated 4 years ago
- ☆37Updated 2 years ago
- Predicting gene expression levels from genomic sequences☆51Updated 4 years ago
- APA Regression Net - Predict and Engineer Alternative Polyadenylation☆39Updated 3 years ago
- Pytorch implementation of the Borzoi model from Calico, and Flashzoi, a 3x faster Borzoi enhancement.☆42Updated last week
- ☆12Updated last year
- Deep learning model built to quantitatively predict the activities of developmental and housekeeping enhancers from DNA sequence in Droso…☆58Updated last year
- ☆32Updated this week
- CLUMPS adapted to post-translational modifications.☆9Updated last year
- A neural network framework for predicting the Hi-C chromatin interactions from megabase scale DNA sequence☆33Updated 10 months ago
- ☆34Updated 2 years ago
- A list of positions (mostly biology-related) open to apply☆34Updated 4 months ago
- ☆25Updated 9 months ago
- ☆41Updated last year
- NetTCR-2.0. Sequence-based prediction of peptide-TCR binding☆33Updated 3 years ago
- Code for the Framepool model☆11Updated last month
- Scripts for building computational models of gene regulation with tensorflow☆10Updated 5 years ago