☆14Jan 18, 2024Updated 2 years ago
Alternatives and similar repositories for HDRNet
Users that are interested in HDRNet are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆19Mar 21, 2024Updated 2 years ago
- ☆29Nov 6, 2022Updated 3 years ago
- ☆13Apr 16, 2026Updated 2 weeks ago
- ☆17Jun 22, 2024Updated last year
- the analysis script for PrismNet☆10May 17, 2020Updated 5 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Tool for modelling of mitochondrial heteroplasmy☆21Jul 16, 2024Updated last year
- Bioinformatic tool for Splice site Strength Estimation using RNA-seq☆22Jul 22, 2025Updated 9 months ago
- Pipeline for using IDR to produce a set of peaks given two replicate eCLIP peaks☆10Feb 16, 2022Updated 4 years ago
- Code of a structure-enhanced RNA language model named ERNIE-RNA☆41Nov 19, 2025Updated 5 months ago
- splicekit: an integrative toolkit for splicing analysis from short-read RNA-seq☆23Nov 28, 2025Updated 5 months ago
- Pipeline to calculate icSHAPE score in genome with sliding window strategy☆13Aug 23, 2022Updated 3 years ago
- Local Interaction Score (LIS) for structure prediction analysis☆68Apr 16, 2026Updated 2 weeks ago
- Gencode UTR fix☆17Jan 11, 2023Updated 3 years ago
- LucaOne’s representational inference code. Use this project for embedding inference.☆68Apr 28, 2026Updated last week
- Serverless GPU API endpoints on Runpod - Get Bonus Credits • AdSkip the infrastructure headaches. Auto-scaling, pay-as-you-go, no-ops approach lets you focus on innovating your application.
- Predicting dynamic cellular protein-RNA interactions using deep learning and in vivo RNA structure☆68Mar 3, 2024Updated 2 years ago
- ☆13Dec 6, 2022Updated 3 years ago
- GOMCL: a toolkit to cluster, evaluate, and extract non-redundant associations of Gene Ontology-based functions☆22Sep 5, 2023Updated 2 years ago
- Primary RNA sequence model☆42May 20, 2024Updated last year
- Official implement of paper "Multi-purpose RNA Language Modeling with Motif-aware Pre-training and Type-guided Fine-tuning"☆60Oct 8, 2024Updated last year
- Motif Scan and Enrichment Analysis (MoSEA)☆17Oct 6, 2020Updated 5 years ago
- NHGNN-DTA: A Node-adaptive Hybrid Graph Neural Network for Interpretable Drug-target Binding Affinity Prediction☆16Nov 14, 2023Updated 2 years ago
- A supervised learning model based on Graph Neural Network to predict gene co-expression from chromatin contacts☆12Mar 22, 2023Updated 3 years ago
- hyb: a bioinformatics pipeline for the analysis of CLASH (crosslinking, ligation and sequencing of hybrids) data☆13Jul 12, 2024Updated last year
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- polyApipe☆19Feb 10, 2025Updated last year
- Nature Methods: RNA foundation model (together with RhoFold)☆367May 27, 2025Updated 11 months ago
- a deep learning architecture for RNA-ligand binding sites prediction☆18Jan 21, 2024Updated 2 years ago
- Geometric deep learning of protein–DNA binding specificity☆78Mar 19, 2025Updated last year
- ☆20Mar 31, 2025Updated last year
- lncHOME (lncRNA Homology Explorer), a computational pipeline that identifies a unique coPARSE-lncRNA class with conserved genomic locatio…☆12Nov 2, 2023Updated 2 years ago
- EdgeSHAPer: Bond-Centric Shapley Value-Based Explanation Method for Graph Neural Networks☆27Mar 30, 2026Updated last month
- ☆94Aug 24, 2025Updated 8 months ago
- GenePert: Leveraging GenePT Embeddings for Gene Perturbation Prediction☆22Oct 29, 2024Updated last year
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Detection and couting alternative TSS in single cells☆17Apr 21, 2024Updated 2 years ago
- Fast Convolutional KAN☆66May 15, 2024Updated last year
- Deep learning protein-protein binding sites prediction☆22Feb 2, 2023Updated 3 years ago
- ☆41Sep 29, 2022Updated 3 years ago
- Toolkit to train base-resolution deep neural networks on functional genomics data and to interpret them☆179Mar 19, 2026Updated last month
- DLPRB: A Deep Learning Approach for Predicting Protein-RNA Binding☆13Nov 29, 2018Updated 7 years ago
- analysis scripts related to Jin et al manuscript on scRNA seq in aging mouse brain☆25Jun 14, 2024Updated last year