zhuhr213 / HDRNet
☆11Updated 10 months ago
Related projects ⓘ
Alternatives and complementary repositories for HDRNet
- Computational Optimization of DNA Activity (CODA)☆39Updated 2 months ago
- a machine learning model to identify nucleotide features determining RNA subcellular localization☆13Updated last year
- ☆16Updated 8 months ago
- Deep Learning the T Cell Receptor Binding Specificity of Neoantigen☆76Updated 2 years ago
- ☆11Updated 11 months ago
- CNN architecture for predicting DNA binding sites for Transcription Factors☆48Updated 5 years ago
- ☆66Updated last year
- Modelling RBP binding preferences to predict RPB binding sites☆11Updated last year
- ☆14Updated 3 months ago
- APA Regression Net - Predict and Engineer Alternative Polyadenylation☆37Updated 3 years ago
- NetTCR-2.0. Sequence-based prediction of peptide-TCR binding☆33Updated 2 years ago
- NeuronMotif: deciphering cis-regulatory codes by layerwise demixing of deep neural networks☆15Updated last year
- code to run EPInformer for gene expression prediction and gene-enhancer links prioritization☆31Updated 2 weeks ago
- Scripts and datasets to reproduce the experiment of the paper "Exploring non-coding RNA functions with deep learning tools"☆12Updated 3 years ago
- Deep learning model built to quantitatively predict the activities of developmental and housekeeping enhancers from DNA sequence in Droso…☆54Updated last year
- BigMHC predicts MHC-I (neo)epitope presentation and immunogenicity☆46Updated 6 months ago
- RNA structure probing and post-transcriptional modifications mapping high-throughput data analysis☆35Updated 3 weeks ago
- ☆22Updated 7 months ago
- Struct2GO:protein function prediction based on Graph pooling algorithm and AlphaFold2 structure information☆25Updated 8 months ago
- ☆38Updated 2 years ago
- ☆29Updated 2 years ago
- Knowledge-primed neural networks☆34Updated last year
- Detailed explanation on how to setup database for NCBI IgBlast executable, and using it in Python☆28Updated 2 years ago
- Seq2Neo: a comprehensive pipeline for cancer neoantigen immunogenicity prediction☆21Updated last year
- ☆16Updated 2 weeks ago
- A neural network framework for predicting the Hi-C chromatin interactions from megabase scale DNA sequence☆33Updated 6 months ago
- Scripts for building computational models of gene regulation with tensorflow☆10Updated 4 years ago
- ScanFold is an RNA sequence scanning pipeline which attempts to identify potentially functional RNA secondary structures. This is done by…☆16Updated 2 years ago
- HLA-II ligand predictor.☆35Updated last year
- A supervised learning model based on Graph Neural Network to predict gene co-expression from chromatin contacts☆11Updated last year