☆17Jun 22, 2024Updated 2 years ago
Alternatives and similar repositories for 3UTRBERT
Users that are interested in 3UTRBERT are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆19Mar 21, 2024Updated 2 years ago
- ☆95Oct 9, 2024Updated last year
- Primary RNA sequence model☆42May 20, 2024Updated 2 years ago
- Nucleic Acids Research 2024:RNA-MSM model is an unsupervised RNA language model based on multiple sequences that outputs both embedding a…☆70Jul 22, 2024Updated 2 years ago
- ☆30Sep 9, 2025Updated 11 months ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- A Foundation Language Model For Multilayer Regulation of RNA☆22Nov 30, 2025Updated 8 months ago
- G4Hunter (2012_2015)- IECB - Bordeaux☆20Apr 7, 2020Updated 6 years ago
- ☆17Dec 2, 2025Updated 8 months ago
- ☆20Oct 18, 2024Updated last year
- ☆35Jan 14, 2025Updated last year
- Modelling RBP binding preferences to predict RPB binding sites☆11Mar 4, 2021Updated 5 years ago
- Code of a structure-enhanced RNA language model named ERNIE-RNA☆45May 3, 2026Updated 3 months ago
- Modelling RBP binding preferences to predict RPB binding sites☆11Aug 11, 2023Updated 3 years ago
- ☆14Jan 18, 2024Updated 2 years ago
- Bare Metal GPUs on DigitalOcean Gradient AI • AdPurpose-built for serious AI teams training foundational models, running large-scale inference, and pushing the boundaries of what's possible.
- ☆30Nov 6, 2022Updated 3 years ago
- ☆12Oct 10, 2024Updated last year
- A dataset for training and benchmarking deep learning models for RNA structure prediction☆68May 8, 2026Updated 3 months ago
- Learning to Generate UTR Sequences for Optimized Ribosome Load and Gene Expression☆25May 11, 2025Updated last year
- Accelerate Molecular Biology Research with Machine Learning☆56Jul 24, 2026Updated 2 weeks ago
- Official implement of paper "Multi-purpose RNA Language Modeling with Motif-aware Pre-training and Type-guided Fine-tuning"☆60Oct 8, 2024Updated last year
- DLPRB: A Deep Learning Approach for Predicting Protein-RNA Binding☆13Nov 29, 2018Updated 7 years ago
- Bioinformatic tool for Splice site Strength Estimation using RNA-seq☆22Jul 22, 2025Updated last year
- structRFM: A fully open structure-guided RNA foundation model for robust structural and functional inference☆38Jun 11, 2026Updated 2 months ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- [NeurIPS 2024] BEACON: Benchmark for Comprehensive RNA Tasks and Language Models☆64Aug 2, 2024Updated 2 years ago
- An Interpretable Self-Attention Network with block-attention and attention-attribution.☆12Sep 22, 2023Updated 2 years ago
- Python implementation of TEISER also capable of using SHAPE structural probing data☆12Jan 7, 2025Updated last year
- The Nosana Dashboard.☆18Aug 6, 2026Updated last week
- ☆12Nov 9, 2020Updated 5 years ago
- Visualise RNA secondary structure in consistent, reproducible and recognisable layouts☆84Jul 19, 2026Updated 3 weeks ago
- Scripts and datasets to reproduce the experiment of the paper "Exploring non-coding RNA functions with deep learning tools"☆16Mar 24, 2021Updated 5 years ago
- SGQuant: Squeezing the Last Bit on Graph Neural Networks with Specialized Quantization☆11Aug 12, 2020Updated 6 years ago
- ☆17Oct 19, 2024Updated last year
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- ☆11Aug 2, 2024Updated 2 years ago
- ☆56Oct 2, 2023Updated 2 years ago
- Alignment of RNAs☆27Jul 31, 2024Updated 2 years ago
- Concise: Keras extension for regulatory genomics☆36Dec 26, 2022Updated 3 years ago
- ☆16Dec 10, 2025Updated 8 months ago
- A repository for neural representational learning of RNA secondary structures☆32Feb 13, 2020Updated 6 years ago
- SpliceTransformer(SpTransformer) is a deep learning tool to predict tissue specific splicing site from pre-mRNA sequence☆35Nov 22, 2024Updated last year