☆17Jun 22, 2024Updated 2 years ago
Alternatives and similar repositories for 3UTRBERT
Users that are interested in 3UTRBERT are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆19Mar 21, 2024Updated 2 years ago
- ☆96Oct 9, 2024Updated last year
- Nucleic Acids Research 2024：RNA-MSM model is an unsupervised RNA language model based on multiple sequences that outputs both embedding a…☆70Jul 22, 2024Updated 2 years ago
- ☆30Sep 9, 2025Updated 11 months ago
- A Foundation Language Model For Multilayer Regulation of RNA☆22Nov 30, 2025Updated 9 months ago
- GPUs on demand by Runpod - Special Offer Available • AdRun AI, ML, and HPC workloads on powerful cloud GPUs—without limits or wasted spend. Deploy GPUs in under a minute and pay by the second.
- Nature Methods: RNA foundation model (together with RhoFold)☆390May 27, 2025Updated last year
- G4Hunter (2012_2015)- IECB - Bordeaux☆21Apr 7, 2020Updated 6 years ago
- ☆18Dec 2, 2025Updated 9 months ago
- ☆20Oct 18, 2024Updated last year
- Modelling RBP binding preferences to predict RPB binding sites☆11Mar 4, 2021Updated 5 years ago
- Code of a structure-enhanced RNA language model named ERNIE-RNA☆46May 3, 2026Updated 3 months ago
- Modelling RBP binding preferences to predict RPB binding sites☆11Aug 11, 2023Updated 3 years ago
- ☆30Nov 6, 2022Updated 3 years ago
- ☆20Dec 5, 2024Updated last year
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- A dataset for training and benchmarking deep learning models for RNA structure prediction☆70May 8, 2026Updated 3 months ago
- Learning to Generate UTR Sequences for Optimized Ribosome Load and Gene Expression☆25May 11, 2025Updated last year
- Accelerate Molecular Biology Research with Machine Learning☆57Jul 24, 2026Updated last month
- Official implement of paper "Multi-purpose RNA Language Modeling with Motif-aware Pre-training and Type-guided Fine-tuning"☆60Oct 8, 2024Updated last year
- DLPRB: A Deep Learning Approach for Predicting Protein-RNA Binding☆13Nov 29, 2018Updated 7 years ago
- [NeurIPS 2024] BEACON: Benchmark for Comprehensive RNA Tasks and Language Models☆65Aug 2, 2024Updated 2 years ago
- An Interpretable Self-Attention Network with block-attention and attention-attribution.☆12Sep 22, 2023Updated 2 years ago
- Bioinformatics pipeline for single-cell 3' UTR isoform quantification☆33Jan 29, 2026Updated 7 months ago
- ☆11May 22, 2026Updated 3 months ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Provide RNA and DNA Foundation Model Benchmarks and Applications☆29Nov 26, 2025Updated 9 months ago
- Scripts and datasets to reproduce the experiment of the paper "Exploring non-coding RNA functions with deep learning tools"☆16Mar 24, 2021Updated 5 years ago
- SGQuant: Squeezing the Last Bit on Graph Neural Networks with Specialized Quantization☆11Aug 12, 2020Updated 6 years ago
- ☆17Oct 19, 2024Updated last year
- ☆11Aug 2, 2024Updated 2 years ago
- ☆57Oct 2, 2023Updated 2 years ago
- cgat-flow repository☆16May 10, 2026Updated 3 months ago
- Alignment of RNAs☆27Jul 31, 2024Updated 2 years ago
- Bionic Reading is a new method facilitating the reading process by guiding the eyes through text with artificial fixation points. As a re…☆15May 20, 2022Updated 4 years ago
- Serverless GPU API endpoints on Runpod - Get Bonus Credits • AdSkip the infrastructure headaches. Auto-scaling, pay-as-you-go, no-ops approach lets you focus on innovating your application.
- Concise: Keras extension for regulatory genomics☆36Dec 26, 2022Updated 3 years ago
- A repository for neural representational learning of RNA secondary structures☆33Feb 13, 2020Updated 6 years ago
- SpliceTransformer(SpTransformer) is a deep learning tool to predict tissue specific splicing site from pre-mRNA sequence☆35Nov 22, 2024Updated last year
- ☆14Dec 15, 2022Updated 3 years ago
- ☆99Aug 24, 2025Updated last year
- Interpretable model of sub-cellular RNA localization.☆12Dec 19, 2022Updated 3 years ago
- Arnie-based DegScore tool.☆27Sep 30, 2022Updated 3 years ago