Alternatives and similar repositories for 3UTRBERT

Users that are interested in 3UTRBERT are comparing it to the libraries listed below

• a96123155 / UTR-LM
  ☆91Updated last year
• chenkenbio / SpliceBERT
  Primary RNA sequence model
  ☆38Updated last year
• mana438 / RNABERT
  ☆57Updated 2 years ago
• CatIIIIIIII / RNAErnie
  Official implement of paper "Multi-purpose RNA Language Modeling with Motif-aware Pre-training and Type-guided Fine-tuning"
  ☆55Updated last year
• a96123155 / TransPHLA-AOMP
  ☆48Updated 3 years ago
• kkyamada / bert-rbp
  ☆29Updated 2 years ago
• ntranoslab / esm-variants
  ☆80Updated 2 years ago
• lbcb-sci / RiNALMo
  RiboNucleic Acid (RNA) Language Model
  ☆128Updated 2 weeks ago
• BackofenLab / RNAProt
  Modelling RBP binding preferences to predict RPB binding sites
  ☆11Updated 2 years ago
• TencentAILabHealthcare / DNAGPT
  ☆45Updated 2 years ago
• ychuest / Awesome-LLMs-meet-genomes
  Explore a comprehensive collection of basic theories, applications, papers, and best practices about Large Language Models (LLMs) in geno…
  ☆101Updated 2 months ago
• KennthShang / MTDP
  Multi-Teacher Distillation for Protein embedding
  ☆12Updated last year
• phbradley / TCRdock
  python tools for TCR:peptide-MHC modeling and analysis
  ☆82Updated last year
• TencentAILabHealthcare / DeepAIR
  ☆38Updated 2 years ago
• uci-cbcl / UFold
  ☆73Updated 5 months ago
• jkobject / geneformer
  ☆79Updated 2 months ago
• KarchinLab / bigmhc
  BigMHC predicts MHC-I (neo)epitope presentation and immunogenicity
  ☆56Updated last year
• tianshilu / pMTnet
  Deep Learning the T Cell Receptor Binding Specificity of Neoantigen
  ☆86Updated 3 years ago
• wukevin / tcr-bert
  Large language modeling applied to T-cell receptor (TCR) sequences.
  ☆57Updated 3 years ago
• lingxusb / Riboformer
  ☆22Updated 4 months ago
• kuixu / PrismNet
  Predicting dynamic cellular protein-RNA interactions using deep learning and in vivo RNA structure
  ☆65Updated last year
• bm2-lab / PanPep
  ☆50Updated last year
• OATML-Markslab / EVE
  Official repository for the paper "Large-scale clinical interpretation of genetic variants using evolutionary data and deep learning". Jo…
  ☆183Updated last year
• Bruce-ywj / ERNIE-RNA
  Code of a structure-enhanced RNA language model named ERNIE-RNA
  ☆25Updated 3 weeks ago
• LinearDesignSoftware / LinearDesign
  The LinearDesign mRNA design software.
  ☆192Updated last year
• oxpig / CaLM
  Protein language model trained on coding DNA
  ☆51Updated 11 months ago
• jimmylihui / GenBench
  ☆23Updated 4 months ago
• Tsedao / MultiRM
  [Nat. Commun.] Code for paper 'Attention-based multi-label neural networks for integrated prediction and interpretation of twelve widely …
  ☆31Updated 3 years ago
• genbio-ai / ModelGenerator
  AIDO.ModelGenerator is a software stack powering the development of an AI-driven Digital Organism (AIDO) by enabling researchers to adapt…
  ☆94Updated 3 weeks ago
• Perturbation-Response-Prediction / PRnet
  PRnet is a flexible and scalable perturbation-conditioned generative model predicting transcriptional responses to unseen complex perturb…
  ☆62Updated 10 months ago