Alternatives and similar repositories for 3UTRBERT

Users that are interested in 3UTRBERT are comparing it to the libraries listed below

• chenkenbio / SpliceBERT
  Primary RNA sequence model
  ☆41Updated last year
• a96123155 / TransPHLA-AOMP
  ☆48Updated 4 years ago
• myzhengSIMM / TranSiGen
  ☆34Updated 11 months ago
• rnasys / LAMAR
  A Foundation Language Model For Multilayer Regulation of RNA
  ☆18Updated last month
• TencentAILabHealthcare / DNAGPT
  ☆45Updated 2 years ago
• BioSequenceAnalysis / Bert-Protein
  ☆17Updated 2 years ago
• KennthShang / MTDP
  Multi-Teacher Distillation for Protein embedding
  ☆12Updated last year
• a96123155 / UTR-LM
  ☆91Updated last year
• kkyamada / bert-rbp
  ☆29Updated 3 years ago
• tianshilu / pMTnet
  Deep Learning the T Cell Receptor Binding Specificity of Neoantigen
  ☆87Updated 3 years ago
• Perturbation-Response-Prediction / PRnet
  PRnet is a flexible and scalable perturbation-conditioned generative model predicting transcriptional responses to unseen complex perturb…
  ☆71Updated last year
• jkobject / geneformer
  ☆88Updated 4 months ago
• jimmylihui / GenBench
  ☆23Updated 6 months ago
• mana438 / RNABERT
  ☆57Updated 2 years ago
• BackofenLab / RNAProt
  Modelling RBP binding preferences to predict RPB binding sites
  ☆11Updated 2 years ago
• sjgosai / boda2
  Computational Optimization of DNA Activity (CODA)
  ☆66Updated 8 months ago
• CatIIIIIIII / RNAErnie
  Official implement of paper "Multi-purpose RNA Language Modeling with Motif-aware Pre-training and Type-guided Fine-tuning"
  ☆56Updated last year
• lbcb-sci / RiNALMo
  RiboNucleic Acid (RNA) Language Model
  ☆146Updated 2 months ago
• ntranoslab / esm-variants
  ☆85Updated 2 years ago
• viragbioinfo / IMMREP_2022_TCRSpecificity
  ☆21Updated 3 years ago
• MedChaabane / DeepBind-with-PyTorch
  CNN architecture for predicting DNA binding sites for Transcription Factors
  ☆52Updated 6 years ago
• PharMolix / LangCell
  Code for "LangCell: Language-Cell Pre-training for Cell Identity Understanding".
  ☆64Updated last year
• Tsedao / MultiRM
  [Nat. Commun.] Code for paper 'Attention-based multi-label neural networks for integrated prediction and interpretation of twelve widely …
  ☆32Updated 4 years ago
• ychuest / Awesome-LLMs-meet-genomes
  Explore a comprehensive collection of basic theories, applications, papers, and best practices about Large Language Models (LLMs) in geno…
  ☆112Updated this week
• OATML-Markslab / EVE
  Official repository for the paper "Large-scale clinical interpretation of genetic variants using evolutionary data and deep learning". Jo…
  ☆187Updated last year
• TencentAILabHealthcare / DeepAIR
  ☆37Updated 2 years ago
• bm2-lab / PanPep
  ☆52Updated 2 years ago
• HelloWorldLTY / UKBioLM
  ☆22Updated 8 months ago
• yikunpku / RNA-MSM
  Nucleic Acids Research 2024：RNA-MSM model is an unsupervised RNA language model based on multiple sequences that outputs both embedding a…
  ☆67Updated last year
• xCompass-AI / GeneCompass
  GeneCompass
  ☆103Updated 3 weeks ago