shapsider / monaeLinks
monae: multi-modal single-cell integration and imputation
☆12Updated last year
Alternatives and similar repositories for monae
Users that are interested in monae are comparing it to the libraries listed below
Sorting:
- A versatile single-cell cross-modality translation method via dual-aligned variational autoencoders☆23Updated last year
- ☆53Updated 9 months ago
- Pytorch implementation of EpiFoundation☆22Updated 7 months ago
- ☆21Updated 5 months ago
- ☆49Updated 6 months ago
- ☆40Updated 2 years ago
- Repository for paper scMulan: a multitask generative pre-trained language model for single-cell analysis.☆61Updated last year
- ☆56Updated last year
- ☆72Updated last year
- Deep Transfer Learning of Drug Sensitivity by Integrating Bulk and Single-cell RNA-seq data☆55Updated last year
- ☆24Updated last year
- A Deep Learning-Based Model for the integration, cross-dataset cross-modality generation, self augmentation and matched multi-omics simul…☆15Updated last month
- Dependency-aware deep generative models for multitasking analysis of spatial genomics data☆36Updated last year
- ☆13Updated 8 months ago
- ☆30Updated last year
- Deep Generative Modeling of RNA Velocity☆35Updated 4 months ago
- a variational autoencoder method for clustering single-cell mutation data☆12Updated last year
- ☆18Updated 3 years ago
- Learning meaningful representations of genes☆19Updated 2 months ago
- Code for evaluating single cell foundation models scBERT and scGPT☆46Updated last year
- scDiff: A General Single-Cell Analysis Framework via Conditional Diffusion Generative Models☆30Updated last year
- ☆12Updated 2 years ago
- Implementation of Phenotype prediction from single-cell RNA-seq data using attention-based neural networks (Bioinformatics 2024).☆12Updated last year
- Codes for paper: scELMo: Embeddings from Language Models are Good Learners for Single-cell Data Analysis☆14Updated 9 months ago
- ☆23Updated 6 months ago
- a light structured Residual autoencoder and mutual nearest neighbor Paring guided Adversarial Network for scRNA-seq batch correction☆15Updated 2 years ago
- Matilda is a multi-task framework for learning from single-cell multimodal omics data. Matilda leverages the information from the multi-m…☆21Updated 3 months ago
- ☆17Updated last year
- Awesome-AI-Meets-Biology is a collection of state-of-the-art, novel, exciting LLMs and agents on biomedical and bioinformatic fields.☆22Updated last month
- Flow2Spatial reconstructs spatial proteomics through transfer learning.☆22Updated 4 months ago