shuzhao-li / BTMLinks
Blood Transcription Modules for interpreting blood transcriptomics data
☆10Updated 7 months ago
Alternatives and similar repositories for BTM
Users that are interested in BTM are comparing it to the libraries listed below
Sorting:
- deepStats: a stastitical toolbox for deeptools and genomic signals☆34Updated 3 years ago
- ☆29Updated 8 months ago
- HOT regions paper☆11Updated 6 years ago
- Millefy: Genome browser-like visualization of single-cell RNA-seq dataset☆29Updated 5 years ago
- ☆16Updated 3 years ago
- Build single sample pair-based (rule-based) classifiers using top-score pairs or random forest for multi-class problems.☆12Updated 2 years ago
- Tools for Adaptive Immune Receptor Sequence-Based Machine and Deep Learning☆11Updated this week
- Accurate estimation and robust modelling of translation dynamics at codon resolution☆20Updated 8 years ago
- R-package to perform metabolomics pre-processing, differential metabolite analysis, metabolite clustering and custom visualisations.☆14Updated 2 weeks ago
- 🐶 hlabud: HLA genotype analysis in R☆16Updated 2 months ago
- The `multiGSEA` R package was designed to run a robust GSEA-based pathway enrichment for multiple omics layers.☆18Updated 2 months ago
- An R package for Splice-aware quantification of translation using Ribo-seq data☆19Updated last year
- Time-Course Multi-Omics data integration☆25Updated last year
- 🧬 🦀 A fast and efficient tool to perform a genome wide Single cell Chromatin State Analysis using multimodal histone modification data.…☆28Updated 3 years ago
- A p-value-free method for controlling false discovery rates in high-throughput biological data with two conditions☆39Updated 2 years ago
- Interactive R package to quantify, analyse and visualise alternative splicing☆37Updated this week
- Create a cromphensive report of DEG list coming from any analysis of RNAseq data☆26Updated last year
- iread☆24Updated 3 years ago
- ☆32Updated last year
- scpca-nf is the Nextflow workflow for processing Single-cell Pediatric Cancer Atlas Portal data☆13Updated this week
- Workflow for ZINB-WaVE + DESeq2 intergration for single-cell RNA-seq☆31Updated 4 years ago
- IRIS: Isoform peptides from RNA splicing for Immunotherapy target Screening☆24Updated 10 months ago
- ☆16Updated last week
- Collection of functions created and/or curated to aid in the visualization and analysis of single-cell data using R.☆16Updated 3 years ago
- RNA-seq data comprehensive data analysis toolbox☆19Updated 2 years ago
- Snakemake pipeline for running MAJIQ☆23Updated last year
- ☆17Updated last year
- Clone of the Bioconductor repository for the RUVSeq package, see https://bioconductor.org/packages/devel/bioc/html/RUVSeq.html for the of…☆14Updated 2 years ago
- Explore the cancer relevance of your gene list☆51Updated 4 months ago
- Scripts to install as a Bioconda package for making workflows☆18Updated 9 months ago