The source code for "High-Parameter Spatial Multi-Omics through Histology-Anchored Integration"
☆32Jan 24, 2026Updated 2 months ago
Alternatives and similar repositories for SpatialEx
Users that are interested in SpatialEx are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆13May 28, 2025Updated 10 months ago
- Official code for the paper 'Uni-Neur2Img: Unified Neural Signal-Guided Image Generation, Editing, and Stylization via Diffusion Transfor…☆20Jan 5, 2026Updated 3 months ago
- 🔬 MCP server for AI-powered napari control. Connect Claude, ChatGPT, Cursor, and other LLMs to napari for interactive image analysis. Pe…☆31Mar 25, 2026Updated 2 weeks ago
- MIPHEI-ViT: Repository to train Image-to-Image H&E to Immunofluorescence models☆40Mar 24, 2026Updated 2 weeks ago
- MorphLink: Bridging Cellular Morphological Behaviors and Molecular Dynamics in Multi-modal Spatial Omics☆16Dec 7, 2025Updated 4 months ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting with the flexibility to host WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Cloudways by DigitalOcean.
- The source code for "A Simple Graph Contrastive Learning Framework for Short Text Classification"☆13Aug 14, 2025Updated 7 months ago
- PyTorch implementation of HisToGene☆54Nov 30, 2021Updated 4 years ago
- Scaling up spatial transcriptomics for large-sized tissues: uncovering cellular-level tissue architecture beyond conventional platforms☆48Oct 22, 2025Updated 5 months ago
- mclSTExp: Multimodal Contrastive Learning for Spatial Gene Expression Prediction Using Histology Images☆41Jan 10, 2025Updated last year
- a computational framework to identify and characterize cell niches from spatial omics data at single-cell resolution☆53Aug 11, 2025Updated 8 months ago
- Spatially Resolved Gene Expression Prediction from H&E Histology Images via Bi-modal Contrastive Learning☆85Oct 22, 2024Updated last year
- The source code of "Deep attention diffusion graph neural networks for text classification"☆13Nov 11, 2023Updated 2 years ago
- The source code of "Improved Graph Contrastive Learning for Short Text Classification"☆12Aug 14, 2025Updated 7 months ago
- ☆27Nov 15, 2025Updated 4 months ago
- Wordpress hosting with auto-scaling on Cloudways • AdFully Managed hosting built for WordPress-powered businesses that need reliable, auto-scalable hosting. Cloudways SafeUpdates now available.
- ☆19Jul 30, 2024Updated last year
- ☆132Feb 13, 2025Updated last year
- Sub-cellular spatial transcriptomics Cell Segmentation☆70Oct 1, 2023Updated 2 years ago
- ☆68Sep 16, 2025Updated 6 months ago
- ☆13Sep 30, 2024Updated last year
- ☆55Mar 28, 2025Updated last year
- ☆17Dec 7, 2023Updated 2 years ago
- Super-resolved spatial transcriptomics by deep data fusion☆73Mar 30, 2023Updated 3 years ago
- Official implementation for "Cluster-wise Graph Transformer with Dual-granularity Kernelized Attention" (NeurIPS2024 Spotlight)☆17Oct 10, 2024Updated last year
- Open source password manager - Proton Pass • AdSecurely store, share, and autofill your credentials with Proton Pass, the end-to-end encrypted password manager trusted by millions.
- ☆12Mar 21, 2024Updated 2 years ago
- A self-supervised learning method with Vision Transformer as backbone network for resolution enhancement in spatial transcriptomics.☆10Aug 25, 2025Updated 7 months ago
- ☆161Dec 20, 2024Updated last year
- ☆118Apr 2, 2026Updated last week
- [IJCAI'23] Prompt Federated Learning for Weather Forecasting: Toward Foundation Models on Meteorological Data.☆14Oct 3, 2024Updated last year
- Code used to benchmark Xenium☆80Jun 30, 2024Updated last year
- SciCount is tool focused on counting and classifying of objects in image-like data and scientific images, with training and example datas…☆11Oct 24, 2023Updated 2 years ago
- Deciphering tumor ecosystems at super-resolution from spatial transcriptomics with TESLA☆64Mar 18, 2024Updated 2 years ago
- ☆54Apr 26, 2022Updated 3 years ago
- Proton VPN Special Offer - Get 70% off • AdSpecial partner offer. Trusted by over 100 million users worldwide. Tested, Approved and Recommended by Experts.
- CUMT 计算机科学与技术 2016版培养方案 课程资源☆10Sep 7, 2022Updated 3 years ago
- Awesome generative spatial omics tools☆23Oct 17, 2025Updated 5 months ago
- [PLoS Computational Biology 2025] Domain-Adversarial Masked Autoencoder (SpaDAMA) for cell type deconvolution in spatial transcriptomics …☆11Nov 6, 2025Updated 5 months ago
- RAnking Markers for CEll Segmentation☆12Feb 22, 2022Updated 4 years ago
- [PLoS Computational Biology 2025] SpaMask: Dual Masking Graph Autoencoder with Contrastive Learning for Spatial Transcriptomics☆13Apr 8, 2025Updated last year
- Dataloader for common proteomics search engine outputs into AnnData format☆14Mar 25, 2026Updated 2 weeks ago
- This repository provides the dataset HEMIT for H&E to mIHC image-to-image translation task☆18Dec 11, 2024Updated last year