hernet / transcriptional-map-nkLinks
We describe a transcriptional reference map of human natural killer (NK) cells based on analysis of scRNA-seq data from both blood and tissue. We also analyze data from various solid tumors and map these onto this reference.
☆11Updated 10 months ago
Alternatives and similar repositories for transcriptional-map-nk
Users that are interested in transcriptional-map-nk are comparing it to the libraries listed below
Sorting:
- Trajectory inference across multiple conditions with condiments: differential topology, progression, differentiation, and expression☆29Updated 8 months ago
- sEV-containing droplet identification in scRNA-seq data (SEVtras)☆26Updated 6 months ago
- Single-cell RNA-seq data-based inference of multilayer inter- and intra-cellular signaling networks☆27Updated 4 years ago
- Aligning gene expression trajectories of single-cell reference and query systems☆73Updated 2 weeks ago
- Estimation of Single-Cell Potency with Single Cell Entropy☆42Updated 2 years ago
- ☆27Updated last week
- ☆20Updated last year
- Unsupervised Inference of Developmental Directions for Single Cells☆22Updated last year
- ☆29Updated 3 months ago
- Code used to create the core and extended GBmap, including downstream analyses (cell-cell interactions, spatial transcriptomics deconvolu…☆60Updated 2 years ago
- Repository for the building, sharing and editing of scRNAseq pipelines for the Lung Cell Atlas☆38Updated 4 years ago
- ☆21Updated 2 years ago
- MERCI for tracing of mitochondrion transfer between single cancer and T cells☆22Updated last year
- Code for major analyses in "Integrative spatial analysis reveals a multi-layered organization of glioblastoma" paper☆50Updated 7 months ago
- ☆13Updated 9 months ago
- Single-Cell Inference of Class Switch Recombination☆19Updated 5 months ago
- Robust identification of perturbed cell types in single-cell RNA-seq data☆32Updated 9 months ago
- Spatial transcriptomics of heart tissue☆22Updated 3 years ago
- ☆37Updated 2 years ago
- Lung cancer 10X analysis☆11Updated 4 years ago
- Data available at: https://www.dropbox.com/sh/jh4s57kgbb0rnxe/AABoMK466cGc1OKsOuFN10wca?dl=0 and https://nyulangone-my.sharepoint.com//g/…☆31Updated 3 years ago
- Ordering gene-expression and functional events in single-cell experiments☆22Updated last year
- Inferring allele-specific copy number aberrations and tumor phylogeography from spatially resolved transcriptomics☆41Updated this week
- R package for decontaminating the spot swapping effect and recovering true expression in spatial transcriptomics data☆32Updated last year
- STRIDE (Spatial TRanscRIptomics DEconvolution by topic modelling) is a cell-type deconvolution tool for spatial transcriptomics by using …☆26Updated last year
- Single-Cell Analysis of Inter-Individual Variability by Interpretable Tensor Decomposition☆61Updated last year
- ☆10Updated 2 years ago
- ☆19Updated 6 months ago
- Functions for single cell data analysis☆32Updated 4 years ago
- Code for the spatial transcriptomic paper on IPF lungs☆19Updated last year