Teichlab / celltypist_wikiLinks
Materials and scripts for building cell type encyclopedia table
☆19Updated 5 months ago
Alternatives and similar repositories for celltypist_wiki
Users that are interested in celltypist_wiki are comparing it to the libraries listed below
Sorting:
- Analysis cell-type-specific functional gene network, with SCINET and HumanNetv3☆43Updated 3 weeks ago
- Standalone shiny server container for viewing CellChat object☆12Updated 4 years ago
- ☆49Updated 10 months ago
- cell type deconvolution for multi-condition bulk RNA-seq data☆26Updated 3 years ago
- Trajectory inference across multiple conditions with condiments: differential topology, progression, differentiation, and expression☆28Updated 6 months ago
- scTyper: a comprehensive pipeline for the cell typing analysis of single-cell RNA-seq data☆30Updated 2 years ago
- Methods to use SNPs or gene expression to classify single cell RNAseq to reference profiles☆29Updated 5 years ago
- ☆56Updated last year
- ☆19Updated 3 years ago
- GEfetch2R - Access Single-cell/Bulk RNA-seq Data from Public Repositories and Benchmark the Subsequent Format Conversion Tools☆36Updated 2 months ago
- Multi-omics profiling of peripheral immune system response to SARS-CoV-2 infection☆40Updated 3 years ago
- Analysis of imbalanced data and its impacts in a scRNA-seq integration setting☆30Updated 3 months ago
- ☆39Updated 3 years ago
- R-package for the analysis of single-cell TCR/BCR data in the Seurat ecosystem☆20Updated 2 months ago
- MACA: Marker-based automatic cell-type annotation for single cell expression data☆25Updated last year
- scWGCNA☆61Updated 2 years ago
- Inference of TCR motifs☆31Updated this week
- NATMI: Network Analysis Toolkit for the Multicellular Interactions☆34Updated 4 years ago
- Whole mouse brain snATAC seq analysis☆26Updated 2 months ago
- ☆39Updated 8 months ago
- Cell age determination by scATAC-seq and bulk-ATAC-seq☆32Updated 9 months ago
- FastIntegrate integrates thousands of scRNA-seq datasets and outputs batch-corrected values for downstream analysis☆23Updated 7 months ago
- ☆21Updated 3 years ago
- Repository for the building, sharing and editing of scRNAseq pipelines for the Lung Cell Atlas☆37Updated 4 years ago
- A unified interface to spatial transcriptomics deconvolution tools☆41Updated last month
- Scalable sequence-informed embedding of single-cell ATAC-seq data with CellSpace☆41Updated 5 months ago
- MarcoPolo is a clustering-free approach to the exploration of bimodally expressed genes along with group information in single-cell RNA-s…☆20Updated 7 months ago
- Identifying tumor cells at the single-cell level using machine learning☆48Updated 7 months ago
- ☆32Updated 5 months ago
- SCRIP(Single Cell Regulatory network Inference using ChIP-seq) is a tool for evaluating the binding enrichment of specific TR at single-c…☆20Updated 11 months ago