Pan-cancer human brain metastases atlas at single-cell resolution
☆23Apr 3, 2025Updated 10 months ago
Alternatives and similar repositories for PBMA
Users that are interested in PBMA are comparing it to the libraries listed below
Sorting:
- Code relating to http://dx.doi.org/10.2139/ssrn.4132721☆11Nov 24, 2022Updated 3 years ago
- Functions to analyze copy number aberrations in single-cell data☆13Feb 3, 2025Updated last year
- ☆32Jan 26, 2022Updated 4 years ago
- ☆25Feb 20, 2025Updated last year
- ☆35Jan 23, 2024Updated 2 years ago
- scRNA-seq analysis of EENT-ONB☆22Jan 14, 2024Updated 2 years ago
- Code generated by Evelyn Fitzsimons (Regmefi)☆11Aug 30, 2024Updated last year
- ☆13Mar 17, 2019Updated 6 years ago
- ☆12Mar 5, 2024Updated last year
- Scripts and Data associated with our publication on genomic signatures to discriminate LUAD and LUSC lung cancer types using TCGA data☆11Mar 2, 2022Updated 3 years ago
- Code repository for TCAT analyses☆14Sep 26, 2025Updated 5 months ago
- Spatial cellular architecture predicts prognosis in glioblastoma - Nature Communications☆25Dec 11, 2023Updated 2 years ago
- ☆13Jun 18, 2018Updated 7 years ago
- ☆16May 21, 2024Updated last year
- repository with the scripts to run examples of the publications with new functionalities of TCGAbiolinks☆17Mar 2, 2022Updated 3 years ago
- ☆63Dec 27, 2023Updated 2 years ago
- ☆32Feb 26, 2025Updated last year
- TLS in HNSCC☆17Apr 24, 2025Updated 10 months ago
- ☆14Apr 11, 2024Updated last year
- A record of the analysis pipelines used to create the HTAPP data☆34Apr 15, 2025Updated 10 months ago
- ☆37Sep 20, 2022Updated 3 years ago
- These are code and scripts for MVI+ HCC scRNA-seq analysis.☆19Aug 24, 2023Updated 2 years ago
- Supplementary data for Petti, et al 2019 scRNA mutation publication☆16Feb 1, 2023Updated 3 years ago
- Code repository for single cell RNA-seq☆41Oct 12, 2020Updated 5 years ago
- ☆18Oct 23, 2023Updated 2 years ago
- STRIDE (Spatial TRanscRIptomics DEconvolution by topic modelling) is a cell-type deconvolution tool for spatial transcriptomics by using …☆17Aug 12, 2022Updated 3 years ago
- analysis script for GBM single cell RNA seq data☆22May 26, 2021Updated 4 years ago
- ☆48Jun 24, 2022Updated 3 years ago
- Code for the manuscript "Single-cell analysis of human primary prostate cancer reveals the heterogeneity of tumor-associated epithelial c…☆25Jun 21, 2022Updated 3 years ago
- Code for major analyses in "Integrative spatial analysis reveals a multi-layered organization of glioblastoma" paper☆55Jan 6, 2025Updated last year
- SPAtial Transcriptomics resource for subCellular and High-throughput platforms☆22Dec 10, 2024Updated last year
- The current study provides a comprehensive insights into the PDAC metastatic biology.☆25Aug 3, 2024Updated last year
- These are scripts for pan-cacner B cells analyses.☆58Jul 22, 2024Updated last year
- Associated code to the manuscript "Characterization of immune cell populations in the tumor microenvironment of colorectal cancer using h…☆111Jun 9, 2025Updated 8 months ago
- Human Endometrial Cell Atlas (HECA). An integrated single-cell reference atlas of the human endometrium.☆30Jun 19, 2024Updated last year
- Materials and scripts for building cell type encyclopedia table☆20Dec 2, 2025Updated 2 months ago
- Reproducibility repository accompanying Wilk, Rustagi, Zhao, et al. "A single-cell atlas of the peripheral immune response to severe COVI…☆50Oct 22, 2021Updated 4 years ago
- The analysis repository for the Open Pediatric Cancer Project☆24Jul 9, 2025Updated 7 months ago
- Morphology-Enhanced Spatial Transcriptome Analysis Integrator☆27Mar 16, 2025Updated 11 months ago