Acribbs / TallyNN
single-cell analysis workflows for double phosphoramidite barcode and UMI Correction (scCOLOR-seq)
☆13Updated last year
Alternatives and similar repositories for TallyNN:
Users that are interested in TallyNN are comparing it to the libraries listed below
- Pipeline to analyze long-read mRNA isoforms and ORF products sequenced in breast cancer using PacBio Single-Molecule technology.☆14Updated 2 years ago
- Isoform co-usage networks from single-cell RNA-seq data☆15Updated last year
- ScisorWiz: Differential Isoform Visualizer for Long-Read RNA Sequencing Data☆16Updated 11 months ago
- Analysis pipeline for our circSC manuscript☆13Updated 2 years ago
- SCASA: Single cell transcript quantification tool☆20Updated last year
- ☆17Updated 8 months ago
- RAGE-seq scripts☆18Updated 3 years ago
- ☆8Updated 3 years ago
- Pipeline to call neoantigens from intron retention events derived from RNA-Seq data.☆28Updated 4 years ago
- Combined mutation recurrence and functional impact to identify coding and non-coding cancer drivers☆15Updated 6 years ago
- The R package "sarlacc" contains a pipeline to analyse nanopore sequencing data. It trims adapter sequences, retrieves optional UMI's, cl…☆13Updated 6 years ago
- knowledge-based genotyping of cancer hotspots from the tumor BAM files☆21Updated 3 years ago
- A collection of perl scripts for NGS analysis☆15Updated 6 months ago
- BANDITS: Bayesian ANalysis of DIfferenTial Splicing☆17Updated last year
- Predicting TF sequence-specificity similarity with weighted alignments☆13Updated 5 years ago
- NeoFuse is a user-friendly pipeline for the prediction of fusion neoantigens from tumor RNA-seq data.☆19Updated 2 years ago
- software for analysis of chromatin feature occupancy profiles from high-throughput sequencing data☆17Updated 5 years ago
- ORF Quantification pipeline for Alternative Splicing☆16Updated 3 years ago
- ☆16Updated 10 months ago
- Single-cell RNA Processing Software☆11Updated 5 months ago
- R package that allows easily performing a complete Hi-C data analysis through a Graphical User Interface☆16Updated 4 years ago
- ☆12Updated 4 years ago
- nanoNOMe (Nucleosome Occupancy and Methylome nanopore sequencing) Analysis☆18Updated 2 years ago
- ☆28Updated 3 months ago
- ☆17Updated 4 years ago
- Allele-Specific Expression by Single-Cell RNA Sequencing☆28Updated 4 years ago
- A pipeline for Smooth-seq data analysis.☆10Updated 3 years ago
- Workflow for Sequenza, cellularity and ploidy☆18Updated last week
- Model-based analysis of APA using 3' end-linked reads☆9Updated 3 years ago
- A tool kit for dissecting cancer evolution from multi-region derived tumor biopsies via somatic mutations☆35Updated 3 years ago