bowmanr / scDNA_myeloidLinks
Processing scripts for single cell DNA sequencing on the Tapestri platform
☆24Updated 2 years ago
Alternatives and similar repositories for scDNA_myeloid
Users that are interested in scDNA_myeloid are comparing it to the libraries listed below
Sorting:
- BRIE: Bayesian Regression for Isoform Estimate in Single Cells☆42Updated last year
- A tool for removing doublets from single-cell RNA-seq data☆74Updated 4 years ago
- mutation(barcode) caller for 10x single cell data☆45Updated 5 years ago
- A comprehensive tool for processing, analyzing and visulizing single cell chromatin accessibility sequencing data☆76Updated 4 months ago
- Discover differential transcript usage from polyA-captured single cell RNA-seq data☆51Updated 2 years ago
- ConsensusTME Gene Sets and R Script☆39Updated last year
- ☆47Updated 6 months ago
- Pileup biallelic SNPs from single-cell and bulk RNA-seq data☆78Updated 3 years ago
- Public code repository for the Banovich Lab at the Translational Genomics Research Institute (TGen).☆46Updated last year
- ☆86Updated 4 years ago
- ☆82Updated last year
- ☆68Updated last year
- Public repository containing research code for the TCGA PanCanAtlas Splicing project☆41Updated 4 years ago
- The following code accompanies a manuscript combining single-cell RNA-sequencing and genotyping to analyze cellular hierarchies in acute …☆39Updated 5 years ago
- ☆55Updated 4 years ago
- A rapid and robust plate-based single cell ATAC-seq (scATAC-seq) method☆43Updated 4 years ago
- Mouse cell atlas☆60Updated 5 years ago
- InstaPrism is an R package for fast implementation of BayesPrism☆37Updated last year
- Reference transcriptome indices build from kallisto for popular organisms☆42Updated last year
- ☆47Updated 5 years ago
- ☆33Updated 6 years ago
- R package for robust clustering of single cell RNA sequencing data☆39Updated 2 years ago
- scWGCNA☆61Updated 2 years ago
- scRNA-seq cell type identification☆43Updated 5 years ago
- R package for robust clustering of single cell RNA sequencing data☆35Updated last year
- This package contains a reference-based function to infer the proportions of a priori known cell subtypes present in a sample representin…☆52Updated 8 months ago
- Bioconductor package esATAC: an Easy-to-use Systematic pipeline for ATAC-seq data analysis☆23Updated 2 years ago
- ☆34Updated 6 years ago
- Integrative pathway enrichment analysis of multivariate omics data☆112Updated 2 weeks ago
- Code accompanying Characterizing genetic intra-tumor heterogeneity across 2,658 human cancer genomes☆43Updated 4 years ago