☆17Jul 29, 2021Updated 4 years ago
Alternatives and similar repositories for CITE-sort
Users that are interested in CITE-sort are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆19Mar 12, 2024Updated 2 years ago
- Normalize CITEseq Data☆70Nov 9, 2025Updated 7 months ago
- ☆20Apr 28, 2026Updated last month
- Materials and scripts for building cell type encyclopedia table☆20Mar 16, 2026Updated 2 months ago
- cTPnet Package☆27Jul 12, 2022Updated 3 years ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- CiteFuse:☆28Feb 7, 2023Updated 3 years ago
- ☆15Nov 9, 2018Updated 7 years ago
- Code and results from TotalSeqC antibody titration and pipeline benchmarking for CITE-seq experiments☆10Mar 13, 2021Updated 5 years ago
- SOMatic is a tool for building Self-Organizing Maps and linking multiple maps.☆14Aug 29, 2024Updated last year
- Fit generalized linear models in python.☆28Mar 6, 2023Updated 3 years ago
- Analysis code and results for dreamlet☆11Apr 16, 2026Updated last month
- Moana: Robust cell type classification of single-cell RNA-Seq data☆24Nov 8, 2018Updated 7 years ago
- Reproducibility workflow for Gigante et al., 2018: Using long-read sequencing to detect imprinted DNA methylation☆23Mar 4, 2019Updated 7 years ago
- Reproducibility for the "Harmonization and Annotation of Single-cell Transcriptomics data with Deep Generative Models" paper☆13Jul 15, 2022Updated 3 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Spatially-resolved Transcriptomics via Epitope Anchoring☆20Apr 1, 2024Updated 2 years ago
- Bioconductor2017 workshop - Analysis of single-cell RNA-seq data: Normalization, dimensionality reduction, clustering, and lineage infere…☆11Aug 4, 2017Updated 8 years ago
- functions and algorithms for single cell RNA-seq analyses☆11Jan 26, 2021Updated 5 years ago
- S3norm ver2 + IDEAS epigenetic state / master peak list☆12Sep 22, 2023Updated 2 years ago
- Shiny app for visualization, exploration of mouse brain single cell gene expression☆12Oct 31, 2018Updated 7 years ago
- 16S rRNA Sequencing Data from the Human Microbiome Project☆10May 14, 2026Updated 3 weeks ago
- Smooth quantile normalization (qsmooth) is a generalization of quantile normalization, which is an average of the two types of assumption…☆52Nov 5, 2022Updated 3 years ago
- Methods for decontamination of single cell data☆64Feb 16, 2025Updated last year
- R package for tissue-specific gene enrichment☆16Mar 10, 2022Updated 4 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Single-Cell Clustering Assessment Framework☆110Oct 27, 2023Updated 2 years ago
- IMGT segment library converted to RepSeq.IO JSON format☆13Mar 21, 2023Updated 3 years ago
- kallisto index tag extractor☆19Jul 6, 2019Updated 6 years ago
- Immune Profiling of Atherosclerotic Plaques Identifies☆10Sep 18, 2023Updated 2 years ago
- Publication Page for MPAL Paper 2019☆86Jun 25, 2020Updated 5 years ago
- Molecular atlas of the human brain vasculature accross development, adulthood and disease at the single-cell level☆14Jul 10, 2024Updated last year
- This contains the dataset for comparing scRNA-seq analysis methods☆93Aug 26, 2020Updated 5 years ago
- Mosaic single cell data integration using non-overlapping features☆39Sep 20, 2022Updated 3 years ago
- single-cell and bulk RNA-seq analyses from counts → pathways → drug candidates.☆22Jan 22, 2026Updated 4 months ago
- Proton VPN Special Offer - Get 70% off • AdSpecial partner offer. Trusted by over 100 million users worldwide. Tested, Approved and Recommended by Experts.
- meta-analysis of new and published human WAT single cell data☆15Mar 12, 2025Updated last year
- methtuple is a methylation caller for methylation events that co-occur on the same DNA fragment from high-throughput bisulfite sequencing…☆16Apr 5, 2022Updated 4 years ago
- ☆20Mar 28, 2017Updated 9 years ago
- ☆21Jul 6, 2023Updated 2 years ago
- Paired-seq☆15Jul 17, 2024Updated last year
- Interactive benchmarking of ranking and assignment methods☆16May 14, 2026Updated 3 weeks ago
- Integrative analysis for scRNA-seq and scTCR-/scBCR-seq data☆21May 21, 2026Updated 2 weeks ago