QiuyuLian / CITE-sort
☆15Updated 3 years ago
Alternatives and similar repositories for CITE-sort:
Users that are interested in CITE-sort are comparing it to the libraries listed below
- cTPnet Package☆24Updated 2 years ago
- NATMI: Network Analysis Toolkit for the Multicellular Interactions☆35Updated 3 years ago
- Quasilinear data representations for single-cell omics data analysis☆42Updated last year
- Identify genes with spatial expression trends in single-cell gene expression data☆50Updated 6 years ago
- Single-Cell Sequencing Quality Control and Processing Software☆30Updated 5 years ago
- benchmark for single-cell RNA-seq imputation methods☆25Updated 10 months ago
- ☆34Updated 8 months ago
- Mosaic single cell data integration using non-overlapping features☆36Updated 2 years ago
- Analysis cell-type-specific functional gene network, with SCINET and HumanNetv3☆39Updated 10 months ago
- A R package for integrated scRNA-seq data analysis using the RPCI algorithm☆44Updated 10 months ago
- SOMatic is a tool for building Self-Organizing Maps and linking multiple maps.☆14Updated 5 months ago
- An unsupervised approach for the integrative analysis of single-cell multi-omics data☆28Updated 4 years ago
- Cluster single cells and analyze cell clade relationships with colorful visualizations.☆45Updated 3 years ago
- R-package for the analysis of single-cell TCR/BCR data in the Seurat ecosystem☆19Updated last year
- Single cell omics biology annotations☆48Updated this week
- scMEGA: Single-cell Multiomic Enhancer-based Gene regulAtory network inference☆37Updated 4 months ago
- Imputation method for scRNA-seq based on low-rank approximation☆75Updated last year
- Evaluation of Cell Type Annotation R Packages on Single Cell RNA-seq Data☆29Updated 11 months ago
- Materials and scripts for building cell type encyclopedia table☆18Updated 3 weeks ago
- Covarying neighborhood analysis (CNA) is a method for finding structure in- and conducting association analysis with multi-sample single-…☆47Updated 3 months ago
- Trajectory inference across multiple conditions with condiments: differential topology, progression, differentiation, and expression☆26Updated last month
- Unified access to several second-generation deconvolution methods☆65Updated last week
- MACA: Marker-based automatic cell-type annotation for single cell expression data☆25Updated last year
- ☆25Updated 3 years ago
- Reproducible pipeline for "Comprehensive evaluation of cell-type quantification methods for immuno-oncology", Sturm et al. 2019, https://…☆42Updated 4 years ago
- All code associated with manuscript detailing scATAC and scRNA-seq following stimulus of PBMCs☆38Updated last year
- supporting code for the multinomial single cell RNA-Seq paper☆51Updated 4 years ago
- Single-cell Scalable Visualization and Analytics☆25Updated 5 years ago
- Hierarchical classification of cells☆23Updated 5 months ago
- Scalable sequence-informed embedding of single-cell ATAC-seq data with CellSpace☆36Updated 2 weeks ago