jyyulab / SJARACNeLinks
Scalable Tool for Gene Network Reverse Engineering
☆25Updated 3 months ago
Alternatives and similar repositories for SJARACNe
Users that are interested in SJARACNe are comparing it to the libraries listed below
Sorting:
- Methods to use SNPs or gene expression to classify single cell RNAseq to reference profiles☆30Updated 5 years ago
- Analysis cell-type-specific functional gene network, with SCINET and HumanNetv3☆45Updated 5 months ago
- Dynamic models for single-cell RNA-seq time series.☆40Updated 7 years ago
- Fast motif matching in R☆46Updated 2 years ago
- Single-cell Scalable Visualization and Analytics☆27Updated 6 years ago
- ☆38Updated 4 months ago
- ☆43Updated 5 years ago
- ☆12Updated last year
- This repository contains HCA Benchmarking codes☆26Updated 6 years ago
- scNMT-seq gastrulation☆42Updated 3 years ago
- Bulk-Sequence Single-Cell Gene Expression Deconvolution Pipeline☆46Updated 2 years ago
- ☆43Updated 2 years ago
- Hierarchical HotNet is an algorithm for finding hierarchies of active subnetworks.☆38Updated 6 years ago
- metadata and data from the database☆42Updated 6 years ago
- Single-cell/nuclei RNA-seq analysis tools in R for a complete workflow.☆57Updated last week
- Evaluation of the effect of quantification choices on RNA velocity estimates☆27Updated 4 years ago
- ☆37Updated 3 weeks ago
- Adaptive Daisy Model to discriminate core-fitness/context-specific essential genes in large scale CRISPR-Cas9 screens☆24Updated 6 years ago
- ConsensusTME Gene Sets and R Script☆39Updated last year
- ☆56Updated 5 years ago
- Workflow for the Association of T-cell receptors from 3' single-cell RNA-seq (WAT3R)☆21Updated 3 years ago
- Tools for assessing clustering robustness☆31Updated 2 weeks ago
- Single-Cell Sequencing Quality Control and Processing Software☆30Updated 6 years ago
- processes GoT amplicon data and generates a table of metrics☆32Updated 3 years ago
- Normalize CITEseq Data☆67Updated 3 months ago
- R package with motifs for use with chromVAR☆28Updated 8 years ago
- Explore the cancer relevance of your gene list☆52Updated last month
- scRNAseq integration with triplet neural networks☆41Updated last week
- Cell type purification by single-cell transcriptome-trained sorting☆14Updated 6 years ago
- Clone identification from single-cell data☆61Updated 3 years ago