jyyulab / SJARACNeLinks
Scalable Tool for Gene Network Reverse Engineering
☆24Updated last year
Alternatives and similar repositories for SJARACNe
Users that are interested in SJARACNe are comparing it to the libraries listed below
Sorting:
- ☆35Updated 3 months ago
- Adaptive Daisy Model to discriminate core-fitness/context-specific essential genes in large scale CRISPR-Cas9 screens☆23Updated 6 years ago
- Bulk-Sequence Single-Cell Gene Expression Deconvolution Pipeline☆45Updated last year
- ☆41Updated 4 years ago
- Dynamic models for single-cell RNA-seq time series.☆40Updated 6 years ago
- Analysis cell-type-specific functional gene network, with SCINET and HumanNetv3☆43Updated last week
- epigenome analysis to rank transcription factors☆30Updated 2 years ago
- Single-cell Scalable Visualization and Analytics☆25Updated 6 years ago
- post-clustering differential expression test☆35Updated 6 years ago
- Workflow for the Association of T-cell receptors from 3' single-cell RNA-seq (WAT3R)☆21Updated 2 years ago
- ☆29Updated 2 years ago
- Linseed: LINear Subspace identification for gene Expresion Deconvolution☆30Updated last month
- scNMT-seq gastrulation☆42Updated 2 years ago
- Fast motif matching in R☆47Updated last year
- NATMI: Network Analysis Toolkit for the Multicellular Interactions☆34Updated 4 years ago
- 🧬 🦀 A fast and efficient tool to perform a genome wide Single cell Chromatin State Analysis using multimodal histone modification data.…☆28Updated 3 years ago
- Methods to use SNPs or gene expression to classify single cell RNAseq to reference profiles☆29Updated 5 years ago
- ⚙️ Matching T-cell repertoire against a database of TCR antigen specificities☆38Updated 6 years ago
- binned motif enrichment analysis and visualisation☆40Updated last month
- Reconstruct the lineage topology of a scRNA-seq differentiation dataset.☆18Updated 4 years ago
- ConsensusTME Gene Sets and R Script☆39Updated last year
- ☆12Updated last year
- Evaluation of the effect of quantification choices on RNA velocity estimates☆27Updated 3 years ago
- ☆28Updated 6 years ago
- COMET Single-Cell Marker Detection tool☆31Updated 2 years ago
- ☆43Updated last year
- R package with motifs for use with chromVAR☆28Updated 7 years ago
- processes GoT amplicon data and generates a table of metrics☆29Updated 2 years ago
- supporting code for the multinomial single cell RNA-Seq paper☆51Updated 4 years ago
- Single-Cell Sequencing Quality Control and Processing Software☆30Updated 5 years ago