dengchunyu / TIP

Related projects ⓘ

Alternatives and complementary repositories for TIP

• YuLab-SMU / tigeR
  🐯 tigeR: Tumor Immunotherapy Gene Expression Data Analysis R package
  ☆28Updated 5 months ago
• ventolab / HECA-Human-Endometrial-Cell-Atlas
  Human Endometrial Cell Atlas (HECA). An integrated single-cell reference atlas of the human endometrium.
  ☆20Updated 5 months ago
• junjunlab / bulkPseudotime
  Pseudotime Analysis for Bulk Data
  ☆13Updated 3 months ago
• jmzeng1314 / GSE76275-TNBC
  ☆17Updated 4 years ago
• jmzeng1314 / mouse-xx-xy-C1
  ☆17Updated 5 years ago
• jmzeng1314 / IDmap
  ☆11Updated 5 years ago
• Xiang-HF-Zhang / Dichotomous-of-innate-immune-landscape
  Dichotomous of innate immune landscape
  ☆17Updated 5 years ago
• Changwuuu / Cuproptosis-pancancer
  ☆18Updated last year
• navinlabcode / HumanBreastCellAtlas
  Repository for codes for the HBCA paper
  ☆35Updated last year
• PaulingLiu / metaICB
  ☆22Updated last year
• gatelabNW / csf_aging
  Single cell transcriptomics reveals cerebrospinal fluid immune dysregulation during healthy brain aging and cognitive impairment
  ☆27Updated last year
• molgenis / scRNA-seq
  ☆18Updated 8 months ago
• smorabit / hdWGCNA_paper
  Code used to run the data analysis in the hdWGCNA manuscript (Morabito et al 2022)
  ☆13Updated last year
• foreverdream2 / dysfunction_interaction_test
  ☆29Updated 6 years ago
• DongqiangZeng0808 / TMEscore
  Calculating Tumor microenvironment score
  ☆27Updated last year
• jokergoo / ComplexHeatmap_v2_paper_code
  ☆17Updated 2 years ago
• Xiaxy-XuLab / PanCAF
  ☆34Updated 2 years ago
• jlaffy / infercna
  Infer Copy Number Alterations and Clonality in (Single-Cell) RNA-Seq Data
  ☆28Updated 10 months ago
• xiayh17 / RNAseqStat2
  ☆16Updated last year
• Precancer / SCC
  Immune evasion before tumor invasion in early squamous lung cell carcinogenesis
  ☆16Updated 3 years ago
• AweKevin / TIIClnc
  Machine learning-based identification of tumor-infiltrating immune cell-associated lncRNAs for improving outcomes and immunotherapy respo…
  ☆13Updated 2 years ago
• XSLiuLab / tumor-immunogenicity-score
  TIGS (Tumor Immunogenicity Score) project https://doi.org/10.7554/eLife.49020
  ☆30Updated 3 years ago
• xjsun1221 / RSEM_with_limma_edgeR_Deseq2
  ☆31Updated 4 years ago
• zgyaru / anti-PD1_ESCC
  ☆15Updated last year
• CICAMS-Liu-lab / ECGEA
  ☆17Updated 3 years ago
• HuangLabUMN / oncoPredict
  An R package for drug response prediction and drug-gene association prediction.
  ☆17Updated 7 months ago
• StatBiomed / SingleCell-Workshop-2021
  Module 4 for HKU Single-cell Workshop
  ☆12Updated 3 years ago
• Japrin / scPip
  A pipeline for scRNA-seq data analysis
  ☆12Updated 10 months ago
• chensujun / scRNA
  ☆29Updated 3 years ago
• dengchunyu / scPagwas
  Obtain trait-relevant cell subpopulations by incorporating pathway activity transformed scRNA-seq data with GWAS data
  ☆15Updated 6 months ago