genome / scrna_mutationsLinks
Supplementary data for Petti, et al 2019 scRNA mutation publication
☆16Updated 3 years ago
Alternatives and similar repositories for scrna_mutations
Users that are interested in scrna_mutations are comparing it to the libraries listed below
Sorting:
- ☆28Updated 6 years ago
- Bead-based single-cell atac processing☆33Updated 4 years ago
- Code accompanying Characterizing genetic intra-tumor heterogeneity across 2,658 human cancer genomes☆44Updated 4 years ago
- Cell type specific enrichments using finemapped variants and quantitative epigenetic data☆47Updated 2 years ago
- CONICS: COpy-Number analysis In single-Cell RNA-Sequencing☆76Updated 2 years ago
- Cell type purification by single-cell transcriptome-trained sorting☆14Updated 6 years ago
- Code and data from Koche et al. Extrachromosomal circular DNA drives oncogenic genome remodeling in neuroblastoma (2020)☆15Updated 5 years ago
- R package for Flexible dot plots☆29Updated 3 years ago
- Single-cell immune repertoire trajectory analysis in R☆11Updated 5 months ago
- processes GoT amplicon data and generates a table of metrics☆32Updated 3 years ago
- Machine learning algorithm to predict biological pathway relationships based on functional genomics networks☆20Updated 7 years ago
- COMET Single-Cell Marker Detection tool☆32Updated 3 years ago
- Repository for scRNAseq study of human kidneys☆15Updated 6 years ago
- a computational pipeline for the quantification of the Tumor Immune contexture from human RNA-seq data☆18Updated 4 years ago
- scRNA-seq cell type identification☆44Updated 6 years ago
- ☆48Updated last year
- ☆17Updated 7 years ago
- <<------ Use SnapATAC!!☆26Updated 6 years ago
- Analysis code for "Perturbation-response genes reveal signaling footprints in cancer gene expression"☆20Updated 7 years ago
- A suite of population scale analysis tools for single-cell genomics data including implementation of Demuxlet / Freemuxlet methods and au…☆58Updated 4 years ago
- Single-cell Case Control Analysis☆52Updated this week
- An R implementation of the Gene Frequency - Inverse Cell Frequency method for single cell data normalization☆15Updated 3 years ago
- Toolkit for single-cell copy number analysis☆29Updated last month
- Epigenetic cell-type deconvolution from Single-Cell Omic Reference profiles☆32Updated 10 months ago
- ☆34Updated 6 years ago
- Repository containing all code for secondary analysis in the manuscript "On the design of CRISPR-based single cell molecular screens", Hi…☆26Updated 4 years ago
- ☆41Updated 7 years ago
- scover☆24Updated 2 years ago
- ☆43Updated 5 years ago
- Robust single cell clustering and comparison of population compositions across tissues and experimental models via similarity analysis.☆15Updated 2 years ago