sanrishiguang / ChenleiLab_CODEX_HCC
codes for article
☆15Updated 2 years ago
Alternatives and similar repositories for ChenleiLab_CODEX_HCC:
Users that are interested in ChenleiLab_CODEX_HCC are comparing it to the libraries listed below
- CeLEry: cell location recovery in single-cell RNA sequencing☆34Updated 2 months ago
- ☆12Updated 3 years ago
- ☆27Updated 2 months ago
- ☆25Updated 10 months ago
- Code related to Shiao, Gouin III, Ing, et al, Cancer Cell 2023.☆10Updated last year
- Code for the spatial transcriptomic paper on IPF lungs☆16Updated 9 months ago
- ☆28Updated last month
- HCC single cell analysis for Alvarez, Benhammou et al.☆16Updated 2 years ago
- Data available at: https://www.dropbox.com/sh/jh4s57kgbb0rnxe/AABoMK466cGc1OKsOuFN10wca?dl=0 and https://nyulangone-my.sharepoint.com//g/…☆30Updated 2 years ago
- Spatial transcriptomics of heart tissue☆20Updated 2 years ago
- ☆27Updated 5 months ago
- ☆19Updated 3 years ago
- ☆14Updated last year
- ☆17Updated last year
- This repository contains the scripts developed for the analysis of CRC samples processed with the 10x VISIUM Spatial Transcriptomics tech…☆11Updated 2 years ago
- ☆16Updated last year
- We describe a transcriptional reference map of human natural killer (NK) cells based on analysis of scRNA-seq data from both blood and ti…☆9Updated 6 months ago
- A computational method to rank and infer drug-responsive cell population towards in-silico drug perturbation using a target-perturbed gen…☆45Updated 8 months ago
- scRNA-seq analysis of EENT-ONB☆20Updated last year
- scTM: A package for topic modelling in transcriptomics data☆20Updated 11 months ago
- ☆21Updated last year
- Code for a multimodal atlas of healthy and injured cell states and niches in the human kidney☆18Updated last year
- R code used to analyze single cell PDAC data☆34Updated 9 months ago
- A computational tool for identification of 3D multi-modal spatial neighborhoods☆11Updated 2 months ago
- ☆18Updated last year
- ☆15Updated last year
- Code associated with the manuscript Spatial Transcriptomics to define transcriptional patterns of zonation and structural components in t…☆17Updated 2 years ago
- ☆11Updated 4 years ago
- spSeudoMap: cell type mapping of spatial transcriptomics using unmatched single-cell RNA-seq data☆12Updated 6 months ago
- ☆24Updated last month