StewartLab / Stewart_TEDDY_Microbiome_AnalysisLinks
Temporal Development of the Gut Microbiome in Early Childhood - The TEDDY Study
☆10Updated 7 years ago
Alternatives and similar repositories for Stewart_TEDDY_Microbiome_Analysis
Users that are interested in Stewart_TEDDY_Microbiome_Analysis are comparing it to the libraries listed below
Sorting:
- Microbiome research☆21Updated 3 years ago
- ☆14Updated 3 years ago
- R package for microbiome analysis. Provides helper functions for common workflows ranging from preprocessing to visualization.☆23Updated last year
- ☆24Updated 5 years ago
- Handy tools for Microbiome analysis in R☆18Updated 6 years ago
- Codes and sample data supporting the Dutch Microbiome Project. The preprint is currently available at https://www.biorxiv.org/content/10.…☆34Updated 4 years ago
- A shiny package for microbiome functional enrichment analysis☆36Updated 2 weeks ago
- ☆12Updated 8 years ago
- MTD: a unique pipeline for host and meta-transcriptome joint and integrative analyses of RNA-seq data☆17Updated 4 months ago
- Microbe-Metabolite INteractions-based metabolic profiles Predictor☆15Updated 2 years ago
- Analysis framework for integrating gut microbiome and host gene expression data☆34Updated 3 years ago
- Professional Comprehensive Omics Data Analysis☆23Updated 2 weeks ago
- Ying's tools for analysis, with particular focus on microbiome data☆41Updated 3 weeks ago
- ☆18Updated 3 years ago
- Code for simulations and analysis for "Latent Variable Modeling for the Microbiome."☆21Updated 5 years ago
- A manually curated database of human gut metabolic modules.☆17Updated 7 years ago
- Software used to develop the TCMA database associated with 10.1016/j.chom.2020.12.001.☆13Updated last year
- 16S rRNA marker gene upstream and dowstream analysis tutorial for the UCT Hex cluster.☆11Updated 4 years ago
- Visualization tool for genetic reassortment☆21Updated 2 weeks ago
- A set of R functions that help faciliate a lot of tedious processing☆18Updated 7 years ago
- Analysis of (gut) microbiome in Qiime2 and R.☆22Updated last year
- Batch effects removal for microbiome data via conditional quantile regression☆31Updated 3 years ago
- ☆15Updated 2 years ago
- Do microbiome analysis with dada2 and phyloseq object☆14Updated last year
- An R package for analysis of microbiome relative abundance data using zero inflated beta GAMLSS and meta-analysis across microbiome studi…☆34Updated 5 years ago
- Schloss Lab Tools for Reproducible Microbiome Research 💩☆31Updated 2 years ago
- Microbiome Analysis Using R Workshop originally organized for the 2018 ASM General Meeting in Atlanta, GA, but regularly updated since.☆27Updated 3 years ago
- Geared towards life scientists wanting to be able to understand and use basic statistical and machine learning methods☆16Updated 5 months ago
- R shiny app for interactive microbiome analysis☆56Updated 5 months ago
- ☆12Updated 6 years ago