Temporal Development of the Gut Microbiome in Early Childhood - The TEDDY Study
☆10Jul 13, 2018Updated 7 years ago
Alternatives and similar repositories for Stewart_TEDDY_Microbiome_Analysis
Users that are interested in Stewart_TEDDY_Microbiome_Analysis are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- A manually curated database of human gut metabolic modules.☆17Jul 27, 2018Updated 7 years ago
- Codes and sample data supporting the Dutch Microbiome Project. The preprint is currently available at https://www.biorxiv.org/content/10.…☆37Jun 24, 2021Updated 4 years ago
- A Reference Pathways Mapper for turning metagenomic functional profiles into pathway/module profiles.☆27Nov 21, 2018Updated 7 years ago
- R package for fetching and parsing data of the Human Microbiome Compendium☆17May 6, 2026Updated last month
- ☆12Jun 12, 2019Updated 7 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- A set of R scripts for the analysis of microbial profiles☆42Jan 9, 2026Updated 5 months ago
- MR project investigating the mediating role of mammographic density in the childhood body size and breast cancer relationship☆11May 14, 2024Updated 2 years ago
- Intelligent and cost-effective bidding on cloud computing instances for bioinformatics pipelines.☆13Dec 8, 2017Updated 8 years ago
- A web application framework for analysis and visualization of High throughput Sequencing metagenomic data☆10Nov 21, 2016Updated 9 years ago
- supplementary tables and files☆11Oct 13, 2023Updated 2 years ago
- Plot microbiome time series in parallel☆27Nov 7, 2023Updated 2 years ago
- Assessing enrichment of complex disease or trait associations among QTLs☆15Jun 15, 2020Updated 5 years ago
- Quantitative Microbiome Profiling☆15Mar 13, 2021Updated 5 years ago
- Code for simulations and analysis for "Latent Variable Modeling for the Microbiome."☆21Dec 30, 2019Updated 6 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Protocols, data and code associated with the MK-SpikeSeq method for quantifying the absolute abundances of microbiota samples☆12May 19, 2021Updated 5 years ago
- ☆16May 21, 2024Updated 2 years ago
- Powerful and robust non-parametric association testing for microbiome data via a zero-inflated quantile approach☆12Mar 21, 2024Updated 2 years ago
- A general metagenomics data mining system focus on robust microbiome research☆60Mar 3, 2026Updated 3 months ago
- HPC pipeline for overlapping V4 16S rRNA reads generated on Illumina MiSeq☆11Sep 1, 2015Updated 10 years ago
- Multi-omics multi-layered network integration and interpretation☆14Oct 15, 2024Updated last year
- Bioinformatics pipeline for nanopore sequencing data☆11Jan 4, 2019Updated 7 years ago
- ☆32Jun 12, 2023Updated 3 years ago
- Code for GBMI trans-ancestry proteome Mendelian randomization satellite paper☆18Dec 25, 2023Updated 2 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Analysis of patch-seq data in pancreatic islets (ND, T2D and T1D)☆11May 9, 2020Updated 6 years ago
- METAgenomic LONgitudinal Differential Abundance method☆16Dec 17, 2019Updated 6 years ago
- ☆18Nov 19, 2022Updated 3 years ago
- ☆15Jun 26, 2025Updated 11 months ago
- ☆12Oct 17, 2017Updated 8 years ago
- Handy tools for Microbiome analysis in R☆18May 22, 2019Updated 7 years ago
- Compute strain abundance in a defined microbial community☆10Jul 27, 2023Updated 2 years ago
- An integrated pipeline for estimating strain-level genomic variation from metagenomic data☆135Oct 6, 2023Updated 2 years ago
- MMQTL is a statistical package applying meta-analysis to detect multiple QTL signals integrating signals among conditions, with control f…☆13Apr 3, 2025Updated last year
- Proton VPN Special Offer - Get 70% off • AdSpecial partner offer. Trusted by over 100 million users worldwide. Tested, Approved and Recommended by Experts.
- A pipeline for the macro- and micro-diversity analyses and visualization of metagenomic-derived populations☆44Apr 4, 2023Updated 3 years ago
- ☆13Jul 22, 2025Updated 10 months ago
- The `multiGSEA` R package was designed to run a robust GSEA-based pathway enrichment for multiple omics layers.☆21May 4, 2026Updated last month
- C++ implementation of the SEM algorithm☆16Dec 18, 2024Updated last year
- ☆19Oct 22, 2024Updated last year
- A metagenomic strategy for harnessing the chemical repertoire of the human microbiome☆33Nov 5, 2025Updated 7 months ago
- A series of templates for a Quarto project to convert a single Markdown input into beautiful and simple Word, HTML, and PDF worksheets.☆14Feb 12, 2022Updated 4 years ago