segrelabgenomics / QTLEnrichLinks
Assessing enrichment of complex disease or trait associations among QTLs
☆15Updated 5 years ago
Alternatives and similar repositories for QTLEnrich
Users that are interested in QTLEnrich are comparing it to the libraries listed below
Sorting:
- This software tool implements the OPERA (omics pleiotropic association) method to test for combinatorial pleiotropic associations of mole…☆36Updated last year
- ☆37Updated 4 years ago
- Regional association plots☆24Updated last year
- harmonization, liftover, and imputation of summary statistics from GWAS☆35Updated 5 years ago
- 🌓 Allele specific analyses across cell states and conditions☆10Updated 3 years ago
- Colocalization analysis of genetic association signals☆53Updated 6 months ago
- GWAS genetics Fine-mapping method☆26Updated last year
- xQTLbiolinks: a comprehensive and scalable tool for integrative analysis of molecular QTLs☆37Updated 10 months ago
- S-LDSC scripts for use on MR server.☆10Updated 4 years ago
- Estimate genetic correlation using predicted expression☆23Updated 7 years ago
- ☆23Updated 5 months ago
- A method which leverages scRNA-seq data to achieve two goals: (1) to infer the cell types in which the disease-associated genes manifest …☆26Updated 3 years ago
- Tissue-Gene Fine-Mapping☆26Updated 9 months ago
- This is a pipeline for calculating weights for TWAS☆32Updated 3 years ago
- ☆19Updated 4 months ago
- Create Regional Association Plots☆12Updated 3 months ago
- A powerful TWAS framework leveraging summary-level reference data☆32Updated 8 months ago
- Code supporting analyses in paper on fine-mapping AD loci☆16Updated 4 years ago
- ☆35Updated 2 years ago
- SCALLOP-INF analysis☆20Updated 2 months ago
- ☆24Updated 4 years ago
- A Shiny tool to define the cell-type of action by integrating single cell expression data with GWAS☆12Updated 7 years ago
- Post-GWAS enrichment, colocalization, TWAS and Mendelian Randomization to integrate molecular QTL and GWAS.☆31Updated 3 weeks ago
- PUMICE: Prediction Using Models Informed by Chromatin conformations and Epigenomics☆12Updated 2 years ago
- Pan cancer summary statistics from meta analyses of UK Biobank and Kaiser GERA cohorts.☆17Updated 5 years ago
- R package for investigating clustered heterogeneity in Mendelian randomization (MR) analyses.☆17Updated 4 years ago
- Seismic R package. Discover cell type-trait associations in minutes for GWAS and single-cell RNA-sequencing data☆25Updated 2 weeks ago
- Descriptions/scripts for pre-process and processed data for FUMA cell specificity analyses (scRNA-seq)☆24Updated 5 years ago
- Kidney Epigenome and Transcriptome-based multi-stage Prioritization☆17Updated 3 years ago
- An R package for creating ggplot2 based miami plots.☆18Updated 9 months ago