segrelabgenomics / QTLEnrichLinks
Assessing enrichment of complex disease or trait associations among QTLs
β15Updated 5 years ago
Alternatives and similar repositories for QTLEnrich
Users that are interested in QTLEnrich are comparing it to the libraries listed below
Sorting:
- Tissue-Gene Fine-Mappingβ21Updated 5 months ago
- π Allele specific analyses across cell states and conditionsβ10Updated 2 years ago
- xQTLbiolinks: a comprehensive and scalable tool for integrative analysis of molecular QTLsβ37Updated 6 months ago
- Regional association plotsβ25Updated last year
- GWAS genetics Fine-mapping methodβ25Updated 10 months ago
- A method which leverages scRNA-seq data to achieve two goals: (1) to infer the cell types in which the disease-associated genes manifest β¦β26Updated 2 years ago
- β36Updated 4 years ago
- Colocalization analysis of genetic association signalsβ52Updated 2 months ago
- This software tool implements the OPERA (omics pleiotropic association) method to test for combinatorial pleiotropic associations of moleβ¦β36Updated 11 months ago
- This is a pipeline for calculating weights for TWASβ32Updated 3 years ago
- PUMICE: Prediction Using Models Informed by Chromatin conformations and Epigenomicsβ12Updated last year
- An R package for creating ggplot2 based miami plots.β17Updated 5 months ago
- Seismic R package. Discover cell type-trait associations in minutes for GWAS and single-cell RNA-sequencing dataβ17Updated 2 months ago
- R package for investigating clustered heterogeneity in Mendelian randomization (MR) analyses.β17Updated 3 years ago
- harmonization, liftover, and imputation of summary statistics from GWASβ33Updated 5 years ago
- β23Updated last month
- Post-GWAS enrichment, colocalization, TWAS and Mendelian Randomization to integrate molecular QTL and GWAS.β28Updated last week
- β19Updated 2 weeks ago
- A powerful TWAS framework leveraging summary-level reference dataβ31Updated 4 months ago
- Estimate local SNP heritability and genetic covariance from GWAS summary association statistics.β41Updated 7 years ago
- Estimate genetic correlation using predicted expressionβ22Updated 7 years ago
- S-LDSC scripts for use on MR server.β10Updated 3 years ago
- Create Regional Association Plotsβ12Updated last year
- Code for our paper: https://www.biorxiv.org/content/10.1101/528463v1β18Updated 5 years ago
- FLAMES: Accurate gene prioritization in GWAS lociβ41Updated 5 months ago
- Code supporting analyses in paper on fine-mapping AD lociβ16Updated 4 years ago
- β23Updated 4 years ago
- A Shiny tool to define the cell-type of action by integrating single cell expression data with GWASβ12Updated 6 years ago
- β18Updated 3 weeks ago
- Integration of TWAS and Colocalization Analysisβ17Updated 9 months ago