Comparison of Adaptive Immune Receptor Repertoires
☆30Jan 29, 2025Updated last year
Alternatives and similar repositories for compairr
Users that are interested in compairr are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Vaeda method for computational doublet annotation☆21Feb 1, 2026Updated 7 months ago
- Immunoglobulin and T-Cell receptor rearrangement software☆52Jan 9, 2026Updated 8 months ago
- CellAnn☆12Nov 3, 2023Updated 2 years ago
- ☆19Apr 20, 2025Updated last year
- Code and data used in The Great Repertoire Project☆30Jun 14, 2021Updated 5 years ago
- Bare Metal GPUs on DigitalOcean Gradient AI • AdPurpose-built for serious AI teams training foundational models, running large-scale inference, and pushing the boundaries of what's possible.
- Analyze antibody repertoires and discover new V genes from high-throughput sequencing reads☆16Dec 5, 2023Updated 2 years ago
- Single-cell immune repertoire trajectory analysis in R☆12Aug 8, 2025Updated last year
- AI model and framework for scoring antibody-antigen complexes☆28Jul 29, 2026Updated last month
- Intelligent and cost-effective bidding on cloud computing instances for bioinformatics pipelines.☆13Dec 8, 2017Updated 8 years ago
- IgSimulator is a versatile tool for simulation of immunoglobulin repertoire☆12Nov 25, 2016Updated 9 years ago
- TRUST4 manuscript evaluation☆17Jul 8, 2022Updated 4 years ago
- flexible CDR based distance metrics☆75Dec 16, 2025Updated 9 months ago
- yaha: a flexible, sensitive and accurate DNA alignment tool designed to find optimal split-read mappings on single-end queries from 100bp…☆20Dec 6, 2017Updated 8 years ago
- ☆15Sep 16, 2026Updated last week
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- A pipeline for making SWIft Genomes in a Graph (SWIGG) using k-mers☆22Nov 22, 2019Updated 6 years ago
- B-cell repertoire and clonal family tree explorer☆18Sep 13, 2026Updated last week
- TCR and BCR assembly from RNA-seq data☆363Aug 27, 2026Updated 3 weeks ago
- Detecting TCR involved in immune responses from single RepSeq datasets☆28Jun 17, 2019Updated 7 years ago
- ☆10May 17, 2021Updated 5 years ago
- Kinship In Mixed Model Analysis of RNA-seq☆16Sep 2, 2026Updated 3 weeks ago
- Temporal Development of the Gut Microbiome in Early Childhood - The TEDDY Study☆11Jul 13, 2018Updated 8 years ago
- A JBrowse plugin for creating sashimi or junction style plots from RNA-seq data☆14Aug 21, 2026Updated last month
- VariantStore: A Large-Scale Genomic Variant Search Index☆40Jul 9, 2021Updated 5 years ago
- GPUs on demand by Runpod - Special Offer Available • AdRun AI, ML, and HPC workloads on powerful cloud GPUs—without limits or wasted spend. Deploy GPUs in under a minute and pay by the second.
- R integration for edlib, a C/C++ library for pairwise sequence alignment using edit distance (Levenshtein distance).☆11Jul 20, 2025Updated last year
- Alignment-free genotyper for SNPs and short indels, implemented in Python.☆58Mar 7, 2025Updated last year
- ☆14May 12, 2023Updated 3 years ago
- Calib clusters barcode tagged paired-end reads based on their barcode and sequence similarity.☆39Jun 6, 2023Updated 3 years ago
- Stitchr - a Python script to stitch together coding TCR nucleotide sequences from V, J, and CDR3 info☆71Mar 12, 2026Updated 6 months ago
- Software for Ontogenic aNalysis of Antibody Repertoires☆19Jun 30, 2026Updated 2 months ago
- ☆15May 11, 2018Updated 8 years ago
- supplementary tables and files☆11Oct 13, 2023Updated 2 years ago
- Sequence simulator☆55Feb 3, 2025Updated last year
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Snakemake workflow for neoantigen prediction☆15Sep 7, 2023Updated 3 years ago
- Analysis of antibody NGS data☆13Mar 19, 2026Updated 6 months ago
- Automatically exported from code.google.com/p/malder☆11Mar 17, 2015Updated 11 years ago
- STARTRAC(Single T-cell Analysis by Rna-seq and Tcr TRACking)☆126Apr 26, 2025Updated last year
- An R package to implement Differential Gene Set Enrichment Analysis (DGSEA): A statistical approach to quantify the relative enrichment o…☆15Apr 12, 2023Updated 3 years ago
- Location of structural errors in a genome assembly and structural variations between a pair of genomes☆11Sep 27, 2019Updated 6 years ago
- A library for working with phylogenetic and population genetic data.☆67Jul 18, 2026Updated 2 months ago