qsu123 / multi_class_diagnosisLinks
☆18Updated 2 years ago
Alternatives and similar repositories for multi_class_diagnosis
Users that are interested in multi_class_diagnosis are comparing it to the libraries listed below
Sorting:
- This is the supplementary code for CRC-multi-kingdom☆17Updated 3 years ago
- Analysis framework for integrating gut microbiome and host gene expression data☆33Updated 3 years ago
- ☆12Updated last year
- Software used to develop the TCMA database associated with 10.1016/j.chom.2020.12.001.☆12Updated last year
- ☆14Updated 3 years ago
- Codes and sample data supporting the Dutch Microbiome Project. The preprint is currently available at https://www.biorxiv.org/content/10.…☆34Updated 4 years ago
- A shiny package for microbiome functional enrichment analysis☆37Updated 3 months ago
- 16S rRNA marker gene upstream and dowstream analysis tutorial for the UCT Hex cluster.☆11Updated 4 years ago
- This repository contains computer codes for main analyses of the manuscript titled 'Multi-omic Landscape of Airway Microbe-Host Interacti…☆32Updated 2 years ago
- Time-Course Multi-Omics data integration☆25Updated last year
- Professional Comprehensive Omics Data Analysis☆23Updated last month
- MTD: a unique pipeline for host and meta-transcriptome joint and integrative analyses of RNA-seq data☆16Updated 3 weeks ago
- Microbiome Projects from the Department of Genetics and Department of Gastroenterology and Hepatology , University Medical Centre Groning…☆57Updated 2 months ago
- Batch effects removal for microbiome data via conditional quantile regression☆31Updated 2 years ago
- ☆19Updated 2 years ago
- R package to predict microbial loads☆16Updated last month
- ☆12Updated last year
- A pipeline to identify pathogenic microorganisms from scRNA-seq raw data.☆27Updated last year
- Microbe-Metabolite INteractions-based metabolic profiles Predictor☆15Updated 2 years ago
- This repository includes the code used in our multiomics BMI study.☆17Updated 2 years ago
- Pipeline & Reproducible analysis examples for amplicon and metagenome in microbiome☆41Updated 5 years ago
- Temporal Development of the Gut Microbiome in Early Childhood - The TEDDY Study☆10Updated 7 years ago
- A script to make downloading of SRA/GEO data easier☆31Updated last year
- ☆17Updated last year
- A R script to perform clustering of gene expression time-series RNA-seq data with Mfuzz.☆22Updated 6 years ago
- R package for microbiome analysis. Provides helper functions for common workflows ranging from preprocessing to visualization.☆23Updated last year
- Scripts for reproducing results shown in Gupta VK et al. "A Predictive Index for Health Status using Species-level Gut Microbiome Profili…☆34Updated 4 years ago
- A manually curated database of human gut metabolic modules.☆18Updated 7 years ago
- ☆31Updated 4 years ago
- ☆20Updated 4 years ago