gavinmdouglas / picrust2_manuscriptLinks
☆24Updated 5 years ago
Alternatives and similar repositories for picrust2_manuscript
Users that are interested in picrust2_manuscript are comparing it to the libraries listed below
Sorting:
- gutSMASH☆55Updated 8 months ago
- Amplicon sequencing pipelines suitable for SSU (16S, 18S), LSU (23S, 28S) and ITS.☆53Updated 3 months ago
- A shiny package for microbiome functional enrichment analysis☆36Updated 5 months ago
- Batch effects removal for microbiome data via conditional quantile regression☆31Updated 3 years ago
- Statistical analysis for sparse high-throughput sequencing☆69Updated 9 months ago
- Transform files to the microtable object with microeco package☆28Updated last month
- Track, Analyze, Visualize: Unravel Your Microbiome's Temporal Pattern with MicrobiomeStat☆44Updated this week
- R package for downstream Microbiome analysis☆30Updated 9 months ago
- R implementation of the LEfSe method☆59Updated 4 months ago
- Model-based Genomically Informed High-dimensional Predictor of Microbial Community Metabolic Profiles☆38Updated last year
- Archive: Data, scripts, and outputs for the Nat. Comm. paper "Analysis of Composition of Microbiomes with Bias Correction". Please check …☆30Updated 4 years ago
- Archive: R functions for Analysis of Composition of Microbiomes (ANCOM). Please check our ANCOMBC R package for the most up-to-date ANCOM…☆63Updated 3 years ago
- A microbiome analysis toolkit for R☆24Updated 2 years ago
- A repository for large-scale microbiome datasets, formatted for phyloseq☆38Updated last year
- ☆12Updated 3 years ago
- Microbiome Analysis Using R Workshop originally organized for the 2018 ASM General Meeting in Atlanta, GA, but regularly updated since.☆27Updated 3 years ago
- The Microbiome Explorer provides methods to analyze and visualize microbial community sequencing data either from the R command line or t…☆72Updated 3 years ago
- ☆15Updated 2 years ago
- ☆56Updated last year
- ☆20Updated 5 years ago
- Course materials for the Genomics Aotearoa Metagenomics Summer School, to be hosted at the University of Auckland in Septermber☆64Updated last year
- Reproducible Analyses accompanying DADA2 + PacBio Manuscript☆32Updated 4 years ago
- ☆41Updated 7 years ago
- Visualize microbiome data with black magic ggtree☆68Updated 5 years ago
- R package for Statistical Inference of Associations between Microbial Communities And host phenoType☆56Updated last year
- Semi-parametric Rank-Based Correlation and Partial Correlation Estimation for Quantitative Microbiome Data☆24Updated 3 years ago
- Compare different differential abundance and expression methods☆52Updated 3 years ago
- A general metagenomics data mining system focus on robust microbiome research☆58Updated last year
- Computational workflows for metagenomics tasks, by the Bhatt lab☆47Updated 2 years ago
- MaAsLin3: Microbiome Multivariate Association with Linear Models☆45Updated 3 weeks ago