☆23May 16, 2020Updated 6 years ago
Alternatives and similar repositories for picrust2_manuscript
Users that are interested in picrust2_manuscript are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Code, unit tests, and tutorials for running PICRUSt2☆397Nov 27, 2025Updated 9 months ago
- A companion R package for the MicrobiomeAnalyst web server☆132Updated this week
- Handy tools for Microbiome analysis in R☆18May 22, 2019Updated 7 years ago
- Implementation of Krona to QIIME2☆16Mar 14, 2024Updated 2 years ago
- The OSDF JSON-Schema files for the HMP project☆14Aug 26, 2021Updated 5 years ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- A short tutorial for Tax4Fun2☆27Aug 24, 2024Updated 2 years ago
- Build a map of genes present across a set of microbial genomes☆18Jan 23, 2026Updated 7 months ago
- An R package to visualize high-throughput sequencing data.☆13Nov 18, 2019Updated 6 years ago
- R package for fetching and parsing data of the Human Microbiome Compendium☆17May 6, 2026Updated 3 months ago
- scripts for microbiome analysis☆12Jul 25, 2024Updated 2 years ago
- Microbiota Analysis in R Easily☆12Jul 14, 2022Updated 4 years ago
- R package for downstream Microbiome analysis☆31Dec 10, 2024Updated last year
- METAgenomic LONgitudinal Differential Abundance method☆16Dec 17, 2019Updated 6 years ago
- microbiome R package☆318Updated this week
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- Workshop 10 - Advanced multivariate analyses☆11Sep 3, 2024Updated 2 years ago
- ☆34Dec 2, 2020Updated 5 years ago
- Processing support for Greengenes2☆15Jul 31, 2023Updated 3 years ago
- Semi-parametric Rank-Based Correlation and Partial Correlation Estimation for Quantitative Microbiome Data☆23May 16, 2026Updated 3 months ago
- ☆18Nov 27, 2022Updated 3 years ago
- A web application framework for analysis and visualization of High throughput Sequencing metagenomic data☆10Nov 21, 2016Updated 9 years ago
- The Biological Observation Matrix (BIOM) Format Project☆98Jun 1, 2026Updated 3 months ago
- Code used in MiCE 8992 Spring 2016☆43Apr 19, 2016Updated 10 years ago
- Temporal Development of the Gut Microbiome in Early Childhood - The TEDDY Study☆11Jul 13, 2018Updated 8 years ago
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- Make Picrust2 Output Analysis and Visualization Easier☆202Aug 11, 2026Updated 3 weeks ago
- paprica - PAthway PRediction by phylogenetIC plAcement☆32Jun 2, 2026Updated 3 months ago
- TIMEOR: Trajectory Inference and Mechanism Exploration with Omics Data in R☆18Feb 22, 2022Updated 4 years ago
- MaAsLin2: Microbiome Multivariate Association with Linear Models☆155Feb 5, 2026Updated 6 months ago
- This is an unofficial repo for Tax4Fun2☆24Apr 30, 2022Updated 4 years ago
- 2025 RAD microbes boot camp☆17Apr 9, 2026Updated 4 months ago
- Pan cancer summary statistics from meta analyses of UK Biobank and Kaiser GERA cohorts.☆17Jul 15, 2020Updated 6 years ago
- ☆20Sep 26, 2022Updated 3 years ago
- Code and results from TotalSeqC antibody titration and pipeline benchmarking for CITE-seq experiments☆10Mar 13, 2021Updated 5 years ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- A comprehensive pipeline for short read metagenomic data☆25Aug 25, 2020Updated 6 years ago
- ☆15Oct 7, 2025Updated 10 months ago
- Website for the Riffomonas Reproducible Research Tutorial Series☆40Jun 26, 2024Updated 2 years ago
- ☆91May 22, 2024Updated 2 years ago
- HPC pipeline for overlapping V4 16S rRNA reads generated on Illumina MiSeq☆11Sep 1, 2015Updated 11 years ago
- An R package for downstream data analysis of microbiome omics data☆291Updated this week
- Snakemake pipeline for amplicon sequencing using dada2☆10Jul 17, 2023Updated 3 years ago