gavinmdouglas / picrust2_manuscriptLinks
☆24Updated 5 years ago
Alternatives and similar repositories for picrust2_manuscript
Users that are interested in picrust2_manuscript are comparing it to the libraries listed below
Sorting:
- ☆15Updated 2 years ago
- Batch effects removal for microbiome data via conditional quantile regression☆32Updated 3 years ago
- A shiny package for microbiome functional enrichment analysis☆38Updated 3 weeks ago
- Amplicon sequencing pipelines suitable for SSU (16S, 18S), LSU (23S, 28S) and ITS.☆55Updated 6 months ago
- R implementation of the LEfSe method☆63Updated last month
- Statistical analysis for sparse high-throughput sequencing☆71Updated last year
- Model-based Genomically Informed High-dimensional Predictor of Microbial Community Metabolic Profiles☆42Updated last year
- gutSMASH☆57Updated 3 months ago
- MTD: a unique pipeline for host and meta-transcriptome joint and integrative analyses of RNA-seq data☆17Updated 5 months ago
- Track, Analyze, Visualize: Unravel Your Microbiome's Temporal Pattern with MicrobiomeStat☆46Updated this week
- Archive: Data, scripts, and outputs for the Nat. Comm. paper "Analysis of Composition of Microbiomes with Bias Correction". Please check …☆31Updated 5 years ago
- Course materials for the Genomics Aotearoa Metagenomics Summer School, to be hosted at the University of Auckland in Septermber☆66Updated last year
- ☆58Updated last year
- A repository for the lessons and notebooks used for Binder tutorials☆19Updated 5 years ago
- Code and analysis results for the CRC shotgun meta-analysis☆38Updated 3 years ago
- Archive: R functions for Analysis of Composition of Microbiomes (ANCOM). Please check our ANCOMBC R package for the most up-to-date ANCOM…☆61Updated 3 years ago
- A general metagenomics data mining system focus on robust microbiome research☆58Updated last year
- Microbiome Analysis Using R Workshop originally organized for the 2018 ASM General Meeting in Atlanta, GA, but regularly updated since.☆27Updated 3 years ago
- R package for Statistical Inference of Associations between Microbial Communities And host phenoType☆57Updated last year
- Metagenomics Workshop☆28Updated 9 years ago
- The is mostly a wrapper tool using phyloseq and microbiome R packages.☆33Updated 3 years ago
- ☆42Updated 8 years ago
- A microbiome analysis toolkit for R☆25Updated 2 years ago
- A set of R scripts for the analysis of microbial profiles☆41Updated this week
- A repository for large-scale microbiome datasets, formatted for phyloseq☆39Updated last year
- R package for downstream Microbiome analysis☆31Updated last year
- Compare different differential abundance and expression methods☆52Updated 3 years ago
- Data, scripts, and lectures for the Introduction to Metagenomics Summer Workshop 2019.☆35Updated 6 years ago
- MaAsLin3: Microbiome Multivariate Association with Linear Models☆51Updated last month
- Semi-parametric Rank-Based Correlation and Partial Correlation Estimation for Quantitative Microbiome Data☆24Updated 3 years ago