Shao-Group / lecture-notes-for-algorithmsLinks
☆37Updated last year
Alternatives and similar repositories for lecture-notes-for-algorithms
Users that are interested in lecture-notes-for-algorithms are comparing it to the libraries listed below
Sorting:
- Immuological gene typing and annotation for genome assembly☆38Updated 7 months ago
- ☆34Updated 10 months ago
- v2.x of the microassembly based somatic variant caller☆23Updated 3 months ago
- Two pass alignment for long reads☆22Updated 4 years ago
- Package Homepage: http://bioconductor.org/packages/devel/bioc/html/DRIMSeq.html Bug Reports: https://support.bioconductor.org/p/new/post/…☆11Updated 5 years ago
- Identify differentially expressed k-mers between RNA-Seq datasets☆11Updated 4 years ago
- End-guided RNA assembler☆15Updated 2 months ago
- Long-read splice alignment with high accuracy☆63Updated last year
- Scripts and files used in the generation of the COLO829 somatic SV truthset.☆13Updated 3 years ago
- Mapping-free software for fishing relevant reads in an RNA-Seq sample☆19Updated 4 years ago
- Accucopy is a computational method that infers Allele-Specific Copy Number alterations from low-coverage low-purity tumor sequencing data…☆17Updated last year
- ☆23Updated 10 months ago
- Teaching modules for Human Genome Variation Lab.☆20Updated 5 months ago
- Blazing fast toolkit to work with .hic and .cool files☆41Updated this week
- Easy genomic regions for short-read variant calling☆44Updated last month
- Calib clusters barcode tagged paired-end reads based on their barcode and sequence similarity.☆39Updated 2 years ago
- Structural variant VCF annotation, duplicate removal and comparison☆34Updated 3 weeks ago
- Isoform-level functional RNA-Seq analysis 🧬☆34Updated 3 weeks ago
- Tools to gather evidence for structural variation via breakpoint detection.☆19Updated 6 months ago
- A bioinformatics best-practice analysis pipeline for the analysis of shallow whole genome sequencing (sWGS) data for the identification o…☆14Updated this week
- R API for browsing, analyzing, and manipulating reference-aligned genome graphs in a GenomicRanges framework☆41Updated last month
- ☆20Updated last year
- Location of public benchmarking; primarily final results☆18Updated 8 months ago
- ☆30Updated 4 months ago
- ☆20Updated 3 years ago
- A library and tool for accessing remote BLOW5 files.☆24Updated last month
- Summarize and filter read alignments from multiple sequencing samples (taken as sorted BAM files)☆17Updated 3 weeks ago
- Long RNA-seq analysis workflow☆20Updated 3 weeks ago
- Abismal is a mapper of FASTQ bisulfite-converted short reads (between 50 and 1000 bases) to a FASTA reference genome.☆19Updated last month
- nanoNOMe (Nucleosome Occupancy and Methylome nanopore sequencing) Analysis☆20Updated 2 years ago