csoneson / iCOBRALinks
Interactive benchmarking of ranking and assignment methods
☆16Updated 3 months ago
Alternatives and similar repositories for iCOBRA
Users that are interested in iCOBRA are comparing it to the libraries listed below
Sorting:
- Curated Data From The Cancer Genome Atlas (TCGA) as MultiAssayExperiment Objects☆44Updated 2 months ago
- countsimQC - Compare characteristic features of count data sets☆27Updated 2 weeks ago
- R package for benchmarking single cell analysis methods☆31Updated last year
- Interactive Differential Expression AnaLysis - DE made accessible and reproducible☆29Updated 2 months ago
- A Grammar of Data Manipulation for Omics Data☆21Updated 4 years ago
- Toolbox package for organizing and working with TCGA data☆28Updated this week
- Single Cell multimodal data scripts for downloading datasets☆17Updated last month
- Repository for signature genes from Immune Cell Atlas☆18Updated 5 years ago
- Query sequence data (VCF/BCF1/BCF2, Tabix, BGEN, PLINK) in R☆30Updated 9 months ago
- Create a cromphensive report of DEG list coming from any analysis of RNAseq data☆26Updated last year
- Integrating zingeR with ZINB-WaVE weights☆24Updated 7 years ago
- ☆20Updated 3 months ago
- R package providing Variance Stabilizing Transformations appropriate for RNA-Seq data☆21Updated last month
- An R Package for Geneset Enrichment Workflows☆76Updated last month
- The official repository of the Bioconductor 2019 Conference Workshops☆25Updated 2 years ago
- Code to reproduce analysis in "Addressing confounding artifacts in reconstruction of gene co-expression networks"☆16Updated 6 years ago
- TOP results by CONfident efFECT Sizes.☆14Updated 7 months ago
- Bioconductor2017 workshop - Analysis of single-cell RNA-seq data: Normalization, dimensionality reduction, clustering, and lineage infere…☆11Updated 7 years ago
- Assessing the increase in power from increasing read depth in a given RNA-Seq study☆13Updated 6 years ago
- zero-inflated negative binomial gene expression in R☆20Updated 7 years ago
- R/BioC package to estimate the cell composition of whole blood in DNA methylation samples in microarray or sequencing platforms☆19Updated 2 years ago
- R package for the recount2 project. Documentation website: http://leekgroup.github.io/recount/☆41Updated 7 months ago
- This is the ensembldb development repository.☆35Updated 10 months ago
- Workflow for ZINB-WaVE + DESeq2 intergration for single-cell RNA-seq☆31Updated 4 years ago
- Molecular Signatures Database (MSigDB) in a data frame☆17Updated 6 years ago
- rbioapi: User-Friendly R Interface to Biologic Web Services' API☆22Updated 2 weeks ago
- Gene-level general linear mixed model☆22Updated 5 months ago
- integrative pathway analysis with modern PCA methodology and gene selection☆11Updated 2 years ago
- An R Bioconductor package providing interactive connections to igv.js (the Integrative Genomics Viewer) in a web browser☆46Updated 8 months ago
- Template for building a bioconductor workshop package using github actions☆20Updated 2 weeks ago