Interactive benchmarking of ranking and assignment methods
☆16May 14, 2026Updated 3 months ago
Alternatives and similar repositories for iCOBRA
Users that are interested in iCOBRA are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Explore design matrices interactively with R/Shiny☆38Apr 28, 2026Updated 3 months ago
- Modeling and correcting fragment sequence bias for RNA-seq☆24Jun 4, 2024Updated 2 years ago
- post-clustering differential expression test☆37May 28, 2019Updated 7 years ago
- R package for benchmarking single cell analysis methods☆33Oct 4, 2023Updated 2 years ago
- PaNeV: an R package for a pathway-based network visualization☆10Aug 25, 2025Updated 11 months ago
- Open source password manager - Proton Pass • AdSecurely store, share, and autofill your credentials with Proton Pass, the end-to-end encrypted password manager trusted by millions.
- Light-weight Snakemake workflow for preprocessing and statistical analysis of RNA-seq data☆168Jun 14, 2026Updated 2 months ago
- ☆19Jun 15, 2023Updated 3 years ago
- Transcript quantification import for modular pipelines☆144Apr 15, 2026Updated 3 months ago
- Lazy evaluated vectors using the ALTREP framework☆19Aug 1, 2019Updated 7 years ago
- Source code of openbiox homepage (under development status).☆14May 9, 2023Updated 3 years ago
- ☆18Nov 16, 2015Updated 10 years ago
- IMGT segment library converted to RepSeq.IO JSON format☆14Mar 21, 2023Updated 3 years ago
- Tool for reliability assessment of omics peprocessing☆12Jan 13, 2026Updated 7 months ago
- Code for the paper "A comprehensive examination of Nanopore native RNA sequencing for characterization of complex transcriptomes"☆20Oct 29, 2019Updated 6 years ago
- Simple, predictable pricing with DigitalOcean hosting • AdAlways know what you'll pay with monthly caps and flat pricing. Enterprise-grade infrastructure trusted by 600k+ customers.
- Bioinformatic tool for Splice site Strength Estimation using RNA-seq☆22Jul 22, 2025Updated last year
- Tools for phylogenetic data analysis including visualization and cluster-computing support.☆15Dec 18, 2021Updated 4 years ago
- A Grammar of Data Manipulation for Omics Data☆21Aug 31, 2020Updated 5 years ago
- Faster manipulation of dendrogram objects in R.☆15May 22, 2015Updated 11 years ago
- Comparison of dimensionality reduction methods☆30Mar 24, 2020Updated 6 years ago
- Rocker image for metabolomics data analysis☆14Oct 25, 2025Updated 9 months ago
- Package Objects☆12Jun 5, 2025Updated last year
- Rapid and robust analysis of RNA-Seq experiments.☆32Apr 16, 2016Updated 10 years ago
- satuRn is a highly performant and scalable method for performing differential transcript usage analyses.☆25Feb 28, 2023Updated 3 years ago
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- a Graph database and R package for omic data integration☆19Oct 28, 2016Updated 9 years ago
- Clone of the Bioconductor repository for the scRNAseq package.☆30Oct 10, 2025Updated 10 months ago
- Finds DAMEs - Differential Allelicly MEthylated regions☆10Jul 29, 2025Updated last year
- Analyzes whole genome sequencing data for gene-editing verification☆13Jul 3, 2026Updated last month
- A tool for Read Multi-Mapper Resolution☆24Feb 15, 2017Updated 9 years ago
- A grammar of genomic data transformation☆154Jul 30, 2026Updated 2 weeks ago
- openbiox 翻译计划☆16Jun 10, 2019Updated 7 years ago
- hyb: a bioinformatics pipeline for the analysis of CLASH (crosslinking, ligation and sequencing of hybrids) data☆14Jul 12, 2024Updated 2 years ago
- Spectral library searching using approximate nearest neighbor techniques.☆50Feb 11, 2026Updated 6 months ago
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- Multi-sample multi-group scRNA-seq analysis tools☆240Jul 6, 2026Updated last month
- Genome Interval Arithmetic in R☆97Jul 9, 2026Updated last month
- Calculation of distance metrics for matrices☆26Mar 1, 2019Updated 7 years ago
- Novel joint clustering method with scRNA-seq and CITE-seq data☆11Jun 22, 2021Updated 5 years ago
- A R framework for pipeline benchmarking, with application to single-cell RNAseq☆44May 20, 2026Updated 2 months ago
- ☆16Dec 11, 2018Updated 7 years ago
- Code associated with: AutoStepfinder: A fast and automated step detection method for single-molecule analysis Luuk Loeff, Jacob W J Kerss…☆12Jun 12, 2024Updated 2 years ago