Hierarchical annotation of immune cells n scRNA-Seq data based on ssGSEA algorithm.
☆12May 31, 2024Updated 2 years ago
Alternatives and similar repositories for scImmuCC
Users that are interested in scImmuCC are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- A method for calculating single cell entropy and reconstructing cell differentiation lineage using single-cell RNA-seq data☆10May 26, 2023Updated 3 years ago
- Spatial Tumor Microenvironment (SpatialTME) database is a comprehensive database designed for characterize tumor spatial microenvironment…☆13Dec 4, 2023Updated 2 years ago
- simpler single cell RNAseq data Visualization☆12Feb 28, 2025Updated last year
- Single-cell RNA-seq data-based inference of multilayer inter- and intra-cellular signaling networks☆31Aug 16, 2021Updated 4 years ago
- ☆34Jan 26, 2022Updated 4 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- An R package to implement Differential Gene Set Enrichment Analysis (DGSEA): A statistical approach to quantify the relative enrichment o…☆15Apr 12, 2023Updated 3 years ago
- ☆17Jul 19, 2024Updated 2 years ago
- An R package for visualising cell-cell interactions☆47Mar 16, 2026Updated 4 months ago
- ☆18Feb 18, 2021Updated 5 years ago
- ☆39Apr 20, 2026Updated 3 months ago
- FastIntegrate integrates thousands of scRNA-seq datasets and outputs batch-corrected values for downstream analysis☆23Oct 25, 2024Updated last year
- Source code and data supporting "Evaluating measures of association for single-cell transcriptomics"☆17Feb 25, 2019Updated 7 years ago
- R package developed for single-cell RNA-seq analysis. It was designed using the Seurat framework, and offers existing and novel single-ce…☆34Nov 28, 2025Updated 8 months ago
- Scripts from the GBM cellular states paper☆21Feb 24, 2021Updated 5 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Principal analysis code used in for analysis of single cell RNAseq of primary untreated colon cancer. As described in: "Spatially organiz…☆41Sep 5, 2021Updated 4 years ago
- Correlation-Based Feature Selection for Single-Cell RNA Sequencing Data☆22Jul 19, 2022Updated 4 years ago
- Deconvolution of spatial transcriptomics at single-cell resolution☆22Mar 25, 2026Updated 4 months ago
- Plática y demostración de como integrar Tensorflow con R☆16May 23, 2019Updated 7 years ago
- ☆22Oct 23, 2023Updated 2 years ago
- ☆11Dec 17, 2025Updated 7 months ago
- Single Cell Cluster Evaluation☆101Jul 28, 2021Updated 5 years ago
- ☆309Nov 10, 2024Updated last year
- methylR: a single shiny solution from sequencer data to pathway analysis☆12Oct 30, 2024Updated last year
- Open source password manager - Proton Pass • AdSecurely store, share, and autofill your credentials with Proton Pass, the end-to-end encrypted password manager trusted by millions.
- ☆26Aug 1, 2022Updated 3 years ago
- Reusable scripts and functions archive for the paper "Organoid single-cell genomic atlas uncovers human-specific features of brain develo…☆40Aug 2, 2021Updated 4 years ago
- Automated Explainable AI for Omics☆36Jun 8, 2026Updated last month
- ☆19May 5, 2020Updated 6 years ago
- ☆15Dec 8, 2023Updated 2 years ago
- Ressources for Boinformatics Trainings☆14Nov 20, 2023Updated 2 years ago
- Processed rna-seq data, copy number variation data, and methylation data on GEO and TCGA☆28Apr 4, 2023Updated 3 years ago
- Genotyping Immunoglobulin Heavy Chain Variable Genes using Short Read Data☆12May 9, 2025Updated last year
- Hierarchical Cell Annotation☆31Nov 17, 2024Updated last year
- Simple, predictable pricing with DigitalOcean hosting • AdAlways know what you'll pay with monthly caps and flat pricing. Enterprise-grade infrastructure trusted by 600k+ customers.
- scAB detects multiresolution cell states with clinical significance☆23Nov 14, 2022Updated 3 years ago
- An integrated platform for modeling gene-regulatory dynamics and networks☆33Nov 11, 2025Updated 8 months ago
- Using Pubmed data and tf.keras to predict if an ophthalmology paper will make it into a top 15 journal☆10May 4, 2020Updated 6 years ago
- ☆10Nov 5, 2023Updated 2 years ago
- Machine learning-based integrative analysis develops an immune-derived lncRNA signature for improving clinical outcomes in colorectal can…☆133May 30, 2025Updated last year
- scID☆14Oct 21, 2021Updated 4 years ago
- R package for pathway analysis in scRNA-seq data☆82Aug 17, 2024Updated last year