Code for running BinderFlow
☆66Nov 21, 2025Updated 6 months ago
Alternatives and similar repositories for BinderFlow
Users that are interested in BinderFlow are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- A Python package to manage protein design workflows on computing clusters and local machines. Documentation can be found here: https://pr…☆44Updated this week
- ☆15Sep 29, 2025Updated 8 months ago
- ☆50Updated this week
- Rapid Generation of Rare Event Pathways Using Direction Guided Adaptive Sampling: From Ligand Unbinding to Protein (Un)Folding☆38Jun 6, 2026Updated last week
- ☆31Jun 2, 2026Updated last week
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- ReaSyn is a model for predicting a molecule's synthesis pathway, reaction steps from building blocks to final product(s), using an encode…☆99Jan 11, 2026Updated 5 months ago
- Repository for "Nearest neighbor search on embeddings rapidly identifies distant protein relations"☆13Apr 2, 2023Updated 3 years ago
- OVO, an open-source ecosystem for de novo protein design☆132Updated this week
- In silico directed evolution of peptide binders with AlphaFold☆269Apr 24, 2026Updated last month
- Flexibility-conditioned protein structure design☆36Mar 10, 2026Updated 3 months ago
- Neural Iterative Selection-Expansion using LigandMPNN/LASErMPNN and Boltz-2x☆33May 11, 2026Updated last month
- ParametrizANI - Fast, Accurate and Free Dihedral Parametrization in the Cloud with TorchANI☆22Jul 28, 2025Updated 10 months ago
- AI-powered biologics design campaign agent — multi-agent orchestration with BoltzGen, PXDesign, Protenix, and 200+ cloud tools. Antibodie…☆83May 21, 2026Updated 3 weeks ago
- Efficient manipulation of protein structures in Python☆69Sep 27, 2025Updated 8 months ago
- GPUs on demand by Runpod - Special Offer Available • AdRun AI, ML, and HPC workloads on powerful cloud GPUs—without limits or wasted spend. Deploy GPUs in under a minute and pay by the second.
- ☆253Feb 12, 2026Updated 4 months ago
- Updated Protpardelle models with more robust motif scaffolding and multichain support☆82May 1, 2026Updated last month
- ☆28Feb 23, 2026Updated 3 months ago
- The central entry point to the P2Rank project with links to the individual projects, including references to documentation, datasets, etc…☆14Feb 11, 2026Updated 4 months ago
- Extension of ThermoMPNN for double mutant predictions☆62Mar 23, 2026Updated 2 months ago
- ☆16Oct 5, 2024Updated last year
- Metrics for our protein design competitions.☆35Nov 1, 2024Updated last year
- Python code to run Thermal Titration Molecular Dynamics (TTMD) simulations☆20Feb 25, 2026Updated 3 months ago
- ☆23May 8, 2026Updated last month
- Proton VPN Special Offer - Get 70% off • AdSpecial partner offer. Trusted by over 100 million users worldwide. Tested, Approved and Recommended by Experts.
- ☆13Apr 1, 2026Updated 2 months ago
- Quantum-mechanical molecular representations☆30Jan 27, 2026Updated 4 months ago
- ☆74Feb 13, 2026Updated 4 months ago
- ☆15Oct 9, 2025Updated 8 months ago
- ☆15Jun 3, 2025Updated last year
- Feynman-Kac steering for controllable protein diffusion☆36Jan 14, 2026Updated 5 months ago
- ☆18Apr 13, 2026Updated 2 months ago
- MD DaVis: A python package to analyze molecular dynamics trajectories of proteins☆17Feb 17, 2025Updated last year
- RAG-ESM is a retrieval-augmented framework that allows to condition pretrained ESM2 protein language models on homologous sequences☆27Aug 21, 2025Updated 9 months ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Official implementation for our paper: Repurposing AlphaFold3-like Protein Folding Models for Antibody Sequence and Structure Co-design☆47Jan 8, 2026Updated 5 months ago
- Protein design and sculpting using Rosetta and Deep learning methods (RFDiff and Alphafold2)☆55Jun 5, 2026Updated last week
- Free Parametrization for Small Molecules☆65May 25, 2026Updated 3 weeks ago
- composite-objective protein design☆335Updated this week
- Makes RELION 3.1 Optics Groups from EPU AFIS data☆18May 8, 2023Updated 3 years ago
- ☆34Apr 16, 2026Updated last month
- ☆586Feb 6, 2025Updated last year