Code for designing binders to flexible peptides with AlphaFold2 Hallucination
☆30Dec 21, 2023Updated 2 years ago
Alternatives and similar repositories for AF2_peptide_hallucination
Users that are interested in AF2_peptide_hallucination are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Small_molecule_binder_design_use_pseudocycles☆26Nov 19, 2024Updated last year
- Graphinity: Equivariant Graph Neural Network Architecture for Predicting Change in Antibody-Antigen Binding Affinity☆13Jul 9, 2025Updated last year
- ☆40Mar 30, 2025Updated last year
- ☆12Dec 2, 2024Updated last year
- ☆24Dec 4, 2025Updated 7 months ago
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- ☆17Oct 30, 2023Updated 2 years ago
- Input files and binding free energy values from our benchmark with QuantumBind-RBFE☆16Apr 16, 2025Updated last year
- ☆38Dec 21, 2023Updated 2 years ago
- GREMLIN is a method to learn a statistical model of a protein family that captures both conservation and co-evolution patterns in the fam…☆25Jul 3, 2016Updated 10 years ago
- scripts to find PBD structures for cancer driver proteins☆31Feb 27, 2026Updated 4 months ago
- Parametric Building of de novo Functional Topologies☆46Mar 11, 2022Updated 4 years ago
- Updated Protpardelle models with more robust motif scaffolding and multichain support☆82May 1, 2026Updated 2 months ago
- Material from papers from KULL centre☆71May 29, 2024Updated 2 years ago
- protein structure generation with sparse all-atom denoising models☆63Jul 7, 2026Updated 2 weeks ago
- Proton VPN Special Offer - Get 70% off • AdSpecial partner offer. Trusted by over 100 million users worldwide. Tested, Approved and Recommended by Experts.
- ☆16Dec 10, 2024Updated last year
- ☆15Mar 28, 2025Updated last year
- A Memetic Algorithm boosts accuracy and speed of all-atom protein-protein docking☆29Jul 5, 2025Updated last year
- What exactly are the non-canonical amino acids in the Rosetta database folder?☆12Feb 16, 2020Updated 6 years ago
- Conditioning diffusion models for scaffolding protein motifs. A repository for my master's dissertation.☆12Dec 10, 2024Updated last year
- Feynman-Kac steering for controllable protein diffusion☆37Jan 14, 2026Updated 6 months ago
- protein docking stuff☆56Apr 2, 2026Updated 3 months ago
- GNN trained to predict changes in thermodynamic stability for protein point mutants☆259Mar 26, 2026Updated 3 months ago
- MaSIF-neosurf: surface-based protein design for ternary complexes.☆177Jun 25, 2026Updated 3 weeks ago
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- The software system of improving AlphaFold2- and AlphaFold-Multimer-based protein tertiary & quaternary structure prediction. It was deve…☆33Dec 14, 2023Updated 2 years ago
- a framework for predicting global protein-protein interaction networks from dynamic mass spec data☆25Mar 20, 2024Updated 2 years ago
- Utility for building inverse rotamer assemblies out of a Rosetta matcher/enzdes constraint file.☆29Mar 8, 2025Updated last year
- A Light-Weight And Interpretable Molecular Docking Model☆26Oct 23, 2024Updated last year
- This repository contains the AlphaCutter.py for the removal of non-globular regions from predicted protein structures.☆15Jul 25, 2023Updated 2 years ago
- Explore protein fold space with deep generative models☆16Aug 5, 2024Updated last year
- ☆16May 18, 2026Updated 2 months ago
- An open-source Rust implementation of Shape Complementarity (SC)☆18Oct 2, 2025Updated 9 months ago
- ☆10Apr 1, 2024Updated 2 years ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- ☆16Jun 22, 2020Updated 6 years ago
- Extension of ThermoMPNN for double mutant predictions☆63Mar 23, 2026Updated 4 months ago
- Inpainting protein sequence and structure☆12Nov 10, 2023Updated 2 years ago
- ☆27Dec 6, 2022Updated 3 years ago
- ☆25Jul 17, 2025Updated last year
- Protein-peptide docking with ESMFold language model☆16May 30, 2026Updated last month
- Metrics to evaluate distributional coverage of generative models of protein structures.☆21Aug 13, 2025Updated 11 months ago