RosettaCommons / AF2_peptide_hallucination
Code for designing binders to flexible peptides with AlphaFold2 Hallucination
☆21Updated last year
Alternatives and similar repositories for AF2_peptide_hallucination:
Users that are interested in AF2_peptide_hallucination are comparing it to the libraries listed below
- ☆31Updated last year
- Making Protein folding accessible to all!☆22Updated last year
- Data sharing for High-throughput Prediction of Changes in Protein Conformational Distributions with Subsampled AlphaFold2☆39Updated 10 months ago
- Extension of ThermoMPNN for double mutant predictions☆31Updated 2 weeks ago
- Controlling the usage of hydrophobic residues on AfDesign for binder peptide design with AlphaFold hallucination protocol☆31Updated last year
- Deep learning framework for protein sequence design from a backbone scaffold that can leverage the molecular context including non-protei…☆38Updated 4 months ago
- ☆43Updated 6 months ago
- Guiding diffusion models for antibody sequence and structure co-design with developability properties.☆32Updated 4 months ago
- ☆26Updated last month
- bakerlab pymol scripts☆21Updated 5 years ago
- GRACE: Generative Renaissance in Artificial Computational Enzyme Design☆16Updated 2 months ago
- Novel estimator for the change in stability upon point mutation in monomeric and multimeric proteins.☆44Updated 3 months ago
- ☆36Updated last year
- scripts to find PBD structures for cancer driver proteins☆31Updated last month
- ☆49Updated 2 weeks ago
- Modelling protein conformational landscape with Alphafold☆46Updated 2 weeks ago
- Structure-based self-supervised learning enables ultrafast prediction of stability changes upon mutations☆54Updated last month
- ☆34Updated 11 months ago
- ☆18Updated 5 months ago
- protein structure generation with sparse all-atom denoising models☆29Updated last month
- HyperMPNN ‒ A general strategy to design thermostable proteins learned from hyperthermophiles☆53Updated last month
- ☆26Updated 7 months ago
- FlexPose, a framework for AI-based flexible modeling of protein-ligand binding pose.☆53Updated last year
- Binding pocket optimization based on force fields and docking scoring functions☆31Updated 2 weeks ago
- DyNoPy☆11Updated 6 months ago
- ☆33Updated 6 months ago
- Some scripts that I keep using over and over.☆18Updated 3 months ago
- Scores for Hydrophobicity and Charges based on SASAs☆31Updated last week
- ☆17Updated 2 months ago
- ☆27Updated 2 years ago